Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm20885-201ENSMUST00000190192 654 ntBASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Gm29740-201ENSMUST00000193182 655 ntBASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Gm36866-201ENSMUST00000193343 657 ntBASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Gm36047-201ENSMUST00000193659 657 ntBASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Gm20857-201ENSMUST00000194766 657 ntBASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Gm20858-201ENSMUST00000195459 657 ntBASIC7.6□□□□□ -1.19
Usp40Q8BWR4 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Gm43659-201ENSMUST00000200894 628 ntBASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 AC161609.1-201ENSMUST00000225878 474 ntBASIC7.6□□□□□ -1.19
Usp40Q8BWR4 AC113031.2-201ENSMUST00000226132 579 ntBASIC7.6□□□□□ -1.19
Usp40Q8BWR4 AC102291.1-201ENSMUST00000227164 529 ntBASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Gm25586-201ENSMUST00000082499 112 ntBASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Gm42874-201ENSMUST00000198888 1774 ntBASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Gm20775-201ENSMUST00000100115 1851 ntBASIC7.6□□□□□ -1.19
Usp40Q8BWR4 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Gm12598-201ENSMUST00000117333 830 ntBASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Gm14212-201ENSMUST00000122023 826 ntBASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Gm10319-202ENSMUST00000159439 846 ntBASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Gm23799-201ENSMUST00000175559 120 ntBASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Gm37438-201ENSMUST00000192813 393 ntBASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Gm38040-201ENSMUST00000193505 225 ntBASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Gm44690-201ENSMUST00000207984 382 ntBASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Gm45660-201ENSMUST00000210267 151 ntBASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Zfp429-203ENSMUST00000224684 524 ntBASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Usp40Q8BWR4 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Usp40Q8BWR4 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Usp40Q8BWR4 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Gm43502-201ENSMUST00000200263 2596 ntBASIC7.58□□□□□ -1.2
Usp40Q8BWR4 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Gm24048-201ENSMUST00000102411 106 ntBASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Gm24190-201ENSMUST00000157976 216 ntBASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Gm15838-201ENSMUST00000161575 180 ntBASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Gm17907-201ENSMUST00000173150 710 ntBASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Gm26318-201ENSMUST00000176507 96 ntBASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Usp40Q8BWR4 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Ighv5-21-201ENSMUST00000191935 295 ntBASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Gm44330-201ENSMUST00000200106 143 ntBASIC7.58□□□□□ -1.2
Usp40Q8BWR4 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Gm45912-201ENSMUST00000210646 543 ntBASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Gm18850-201ENSMUST00000211578 388 ntBASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC7.58□□□□□ -1.2
Usp40Q8BWR4 AC155808.1-201ENSMUST00000219288 409 ntBASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC7.58□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms