Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC5.34□□□□□ -1.55
Nup54Q8BTS4 Gm29161-201ENSMUST00000188250 699 ntBASIC5.34□□□□□ -1.55
Nup54Q8BTS4 Gm8581-201ENSMUST00000188636 890 ntBASIC5.34□□□□□ -1.55
Nup54Q8BTS4 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Nup54Q8BTS4 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC5.34□□□□□ -1.55
Nup54Q8BTS4 Gm18864-201ENSMUST00000194518 1051 ntBASIC5.34□□□□□ -1.55
Nup54Q8BTS4 Gm18036-201ENSMUST00000195256 272 ntBASIC5.34□□□□□ -1.55
Nup54Q8BTS4 Gm6649-201ENSMUST00000199743 1165 ntBASIC5.34□□□□□ -1.55
Nup54Q8BTS4 Gm44307-201ENSMUST00000204466 764 ntBASIC5.34□□□□□ -1.55
Nup54Q8BTS4 Gm20368-201ENSMUST00000220716 301 ntBASIC5.34□□□□□ -1.55
Nup54Q8BTS4 Gm2645-201ENSMUST00000223516 547 ntBASIC5.34□□□□□ -1.55
Nup54Q8BTS4 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Nup54Q8BTS4 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nup54Q8BTS4 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Nup54Q8BTS4 Gm4822-201ENSMUST00000077551 479 ntBASIC5.34□□□□□ -1.55
Nup54Q8BTS4 Gm23972-201ENSMUST00000083322 165 ntBASIC5.34□□□□□ -1.55
Nup54Q8BTS4 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nup54Q8BTS4 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nup54Q8BTS4 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
Nup54Q8BTS4 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nup54Q8BTS4 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Nup54Q8BTS4 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.34□□□□□ -1.55
Nup54Q8BTS4 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nup54Q8BTS4 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nup54Q8BTS4 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.34□□□□□ -1.55
Nup54Q8BTS4 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Nup54Q8BTS4 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Nup54Q8BTS4 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
Nup54Q8BTS4 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Nup54Q8BTS4 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.34□□□□□ -1.56
Nup54Q8BTS4 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.33□□□□□ -1.56
Nup54Q8BTS4 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Nup54Q8BTS4 Gm33378-201ENSMUST00000219831 2758 ntBASIC5.33□□□□□ -1.56
Nup54Q8BTS4 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nup54Q8BTS4 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Nup54Q8BTS4 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.33□□□□□ -1.56
Nup54Q8BTS4 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
Nup54Q8BTS4 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nup54Q8BTS4 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nup54Q8BTS4 Gm25843-201ENSMUST00000122582 314 ntBASIC5.33□□□□□ -1.56
Nup54Q8BTS4 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.33□□□□□ -1.56
Nup54Q8BTS4 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nup54Q8BTS4 Gm24685-201ENSMUST00000157764 285 ntBASIC5.33□□□□□ -1.56
Nup54Q8BTS4 Gm10087-201ENSMUST00000167650 330 ntBASIC5.33□□□□□ -1.56
Nup54Q8BTS4 Gm5066-201ENSMUST00000188479 822 ntBASIC5.33□□□□□ -1.56
Nup54Q8BTS4 Gm43712-201ENSMUST00000198020 291 ntBASIC5.33□□□□□ -1.56
Nup54Q8BTS4 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nup54Q8BTS4 Gm19196-201ENSMUST00000209258 357 ntBASIC5.33□□□□□ -1.56
Nup54Q8BTS4 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC5.33□□□□□ -1.56
Nup54Q8BTS4 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.33□□□□□ -1.56
Nup54Q8BTS4 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.33□□□□□ -1.56
Nup54Q8BTS4 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.33□□□□□ -1.56
Nup54Q8BTS4 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.33□□□□□ -1.56
Nup54Q8BTS4 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.33□□□□□ -1.56
Nup54Q8BTS4 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Nup54Q8BTS4 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Nup54Q8BTS4 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.33□□□□□ -1.56
Nup54Q8BTS4 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Nup54Q8BTS4 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nup54Q8BTS4 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
Nup54Q8BTS4 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Nup54Q8BTS4 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Nup54Q8BTS4 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Gm11550-201ENSMUST00000118210 699 ntBASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Gm13435-201ENSMUST00000120111 1023 ntBASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Gm15388-201ENSMUST00000121578 726 ntBASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Gm13738-201ENSMUST00000122437 469 ntBASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Gm25389-201ENSMUST00000157340 286 ntBASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Gm27688-201ENSMUST00000183634 91 ntBASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Gm28061-201ENSMUST00000189085 807 ntBASIC5.32□□□□□ -1.56
Nup54Q8BTS4 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Gm2623-201ENSMUST00000199229 286 ntBASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Gm42459-201ENSMUST00000199679 742 ntBASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Gm18325-201ENSMUST00000203228 835 ntBASIC5.32□□□□□ -1.56
Nup54Q8BTS4 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Gm5750-201ENSMUST00000218711 801 ntBASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Gm6049-201ENSMUST00000222369 458 ntBASIC5.32□□□□□ -1.56
Nup54Q8BTS4 AC079644.3-201ENSMUST00000222452 357 ntBASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Gm18247-201ENSMUST00000222937 601 ntBASIC5.32□□□□□ -1.56
Nup54Q8BTS4 AV026068-237ENSMUST00000226075 572 ntBASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Gm23927-201ENSMUST00000082466 215 ntBASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Gm23514-201ENSMUST00000082827 130 ntBASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Nup54Q8BTS4 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Nup54Q8BTS4 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 117.4 ms