Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Mir3473f-201ENSMUST00000183743 136 ntBASIC11.57□□□□□ -0.56
Trim41Q5NCC3 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim41Q5NCC3 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC11.57□□□□□ -0.56
Trim41Q5NCC3 Gm17994-201ENSMUST00000209260 533 ntBASIC11.57□□□□□ -0.56
Trim41Q5NCC3 AC160970.1-201ENSMUST00000219311 475 ntBASIC11.57□□□□□ -0.56
Trim41Q5NCC3 AC168062.2-201ENSMUST00000228907 422 ntBASIC11.57□□□□□ -0.56
Trim41Q5NCC3 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim41Q5NCC3 n-R5s94-201ENSMUST00000082573 119 ntBASIC11.57□□□□□ -0.56
Trim41Q5NCC3 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim41Q5NCC3 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trim41Q5NCC3 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim41Q5NCC3 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim41Q5NCC3 Gm37420-201ENSMUST00000195332 2912 ntBASIC11.57□□□□□ -0.56
Trim41Q5NCC3 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim41Q5NCC3 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim41Q5NCC3 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim41Q5NCC3 Gm21846-201ENSMUST00000179257 3073 ntBASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Gm44704-201ENSMUST00000208963 1990 ntBASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Gm45073-201ENSMUST00000207688 4247 ntBASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Gm25917-201ENSMUST00000104267 130 ntBASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Gm14512-201ENSMUST00000117924 230 ntBASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Gm14870-201ENSMUST00000118414 156 ntBASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Gm12878-201ENSMUST00000118744 332 ntBASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Gm5383-201ENSMUST00000121177 617 ntBASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Gm23276-201ENSMUST00000157913 138 ntBASIC11.56□□□□□ -0.56
Trim41Q5NCC3 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Gm44361-201ENSMUST00000197960 94 ntBASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Gm44149-201ENSMUST00000204256 226 ntBASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Gm9278-201ENSMUST00000205508 553 ntBASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim41Q5NCC3 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim41Q5NCC3 AC132121.1-201ENSMUST00000220774 332 ntBASIC11.56□□□□□ -0.56
Trim41Q5NCC3 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Gm18878-201ENSMUST00000223071 1443 ntBASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Gm23851-201ENSMUST00000083831 103 ntBASIC11.56□□□□□ -0.56
Trim41Q5NCC3 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Gm21781-201ENSMUST00000178920 4838 ntBASIC11.56□□□□□ -0.56
Trim41Q5NCC3 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trim41Q5NCC3 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trim41Q5NCC3 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim41Q5NCC3 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim41Q5NCC3 Gm19035-201ENSMUST00000193299 1742 ntBASIC11.55□□□□□ -0.56
Trim41Q5NCC3 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim41Q5NCC3 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim41Q5NCC3 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim41Q5NCC3 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Trim41Q5NCC3 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim41Q5NCC3 Gm14510-201ENSMUST00000116165 1092 ntBASIC11.55□□□□□ -0.56
Trim41Q5NCC3 Gm15231-201ENSMUST00000119174 447 ntBASIC11.55□□□□□ -0.56
Trim41Q5NCC3 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC11.55□□□□□ -0.56
Trim41Q5NCC3 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC11.55□□□□□ -0.56
Trim41Q5NCC3 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Trim41Q5NCC3 Gm44281-201ENSMUST00000203090 166 ntBASIC11.55□□□□□ -0.56
Trim41Q5NCC3 Gm18838-201ENSMUST00000204855 886 ntBASIC11.55□□□□□ -0.56
Trim41Q5NCC3 Gm8999-201ENSMUST00000204951 969 ntBASIC11.55□□□□□ -0.56
Trim41Q5NCC3 Gm4558-201ENSMUST00000207886 521 ntBASIC11.55□□□□□ -0.56
Trim41Q5NCC3 Gm24695-201ENSMUST00000083877 83 ntBASIC11.55□□□□□ -0.56
Trim41Q5NCC3 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim41Q5NCC3 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim41Q5NCC3 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim41Q5NCC3 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim41Q5NCC3 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim41Q5NCC3 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim41Q5NCC3 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC11.55□□□□□ -0.56
Trim41Q5NCC3 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 AC135119.1-202ENSMUST00000228435 2203 ntBASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Gm22656-201ENSMUST00000104199 171 ntBASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Gm16394-201ENSMUST00000117289 675 ntBASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Gm14927-201ENSMUST00000120283 454 ntBASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Gm26357-201ENSMUST00000158218 115 ntBASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Gm24729-201ENSMUST00000158225 137 ntBASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Gm22252-201ENSMUST00000179316 79 ntBASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms