Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Gm37492-201ENSMUST00000191948 376 ntBASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Gm9134-201ENSMUST00000193186 551 ntBASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Ighv1-35-201ENSMUST00000195265 351 ntBASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Gm42459-201ENSMUST00000199679 742 ntBASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Gm24706-201ENSMUST00000082806 137 ntBASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Mir337-201ENSMUST00000083592 97 ntBASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Gm33378-201ENSMUST00000219831 2758 ntBASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Gm44248-201ENSMUST00000203079 1549 ntBASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Gm23692-201ENSMUST00000101881 160 ntBASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Gm23274-201ENSMUST00000104056 130 ntBASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Gm14086-201ENSMUST00000117152 173 ntBASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Gm11893-201ENSMUST00000117829 491 ntBASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Gm14485-201ENSMUST00000119489 493 ntBASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Gm23837-201ENSMUST00000122656 286 ntBASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Gm5139-201ENSMUST00000175943 249 ntBASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Gm8919-201ENSMUST00000182028 1014 ntBASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Gm2623-201ENSMUST00000199229 286 ntBASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Gm44776-201ENSMUST00000207212 381 ntBASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Gm3912-203ENSMUST00000211024 367 ntBASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 AC154484.2-201ENSMUST00000228359 818 ntBASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Gm4822-201ENSMUST00000077551 479 ntBASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Mir188-201ENSMUST00000083464 68 ntBASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Upf3bQ3ULL6 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Upf3bQ3ULL6 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.47□□□□□ -1.53
Upf3bQ3ULL6 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Upf3bQ3ULL6 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.47□□□□□ -1.53
Upf3bQ3ULL6 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Upf3bQ3ULL6 Gm4342-201ENSMUST00000118982 367 ntBASIC5.47□□□□□ -1.53
Upf3bQ3ULL6 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.47□□□□□ -1.53
Upf3bQ3ULL6 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Upf3bQ3ULL6 Gm6542-201ENSMUST00000153606 772 ntBASIC5.47□□□□□ -1.53
Upf3bQ3ULL6 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Upf3bQ3ULL6 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Upf3bQ3ULL6 Gm18177-201ENSMUST00000188373 404 ntBASIC5.47□□□□□ -1.53
Upf3bQ3ULL6 Gm37436-201ENSMUST00000193842 1085 ntBASIC5.47□□□□□ -1.53
Upf3bQ3ULL6 Gm29813-201ENSMUST00000195856 447 ntBASIC5.47□□□□□ -1.53
Upf3bQ3ULL6 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5.47□□□□□ -1.53
Upf3bQ3ULL6 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.47□□□□□ -1.53
Upf3bQ3ULL6 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.47□□□□□ -1.53
Upf3bQ3ULL6 Gm19256-201ENSMUST00000218550 231 ntBASIC5.47□□□□□ -1.53
Upf3bQ3ULL6 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Upf3bQ3ULL6 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Upf3bQ3ULL6 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Upf3bQ3ULL6 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Upf3bQ3ULL6 Gm23972-201ENSMUST00000083322 165 ntBASIC5.47□□□□□ -1.53
Upf3bQ3ULL6 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Upf3bQ3ULL6 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Upf3bQ3ULL6 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Upf3bQ3ULL6 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 120.3 ms