Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col17a1Q07563 Gm43771-201ENSMUST00000202931 1578 ntBASIC8.24□□□□□ -1.09
Col17a1Q07563 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Col17a1Q07563 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col17a1Q07563 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col17a1Q07563 AC124556.1-201ENSMUST00000218256 1319 ntBASIC8.23□□□□□ -1.09
Col17a1Q07563 Gm20300-201ENSMUST00000214634 3440 ntBASIC8.23□□□□□ -1.09
Col17a1Q07563 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col17a1Q07563 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC8.23□□□□□ -1.09
Col17a1Q07563 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Col17a1Q07563 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col17a1Q07563 Gm37967-201ENSMUST00000195634 2665 ntBASIC8.23□□□□□ -1.09
Col17a1Q07563 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col17a1Q07563 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC8.23□□□□□ -1.09
Col17a1Q07563 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Col17a1Q07563 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col17a1Q07563 Gm15161-201ENSMUST00000117340 387 ntBASIC8.23□□□□□ -1.09
Col17a1Q07563 Gm6027-201ENSMUST00000121467 756 ntBASIC8.23□□□□□ -1.09
Col17a1Q07563 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col17a1Q07563 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col17a1Q07563 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col17a1Q07563 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col17a1Q07563 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC8.23□□□□□ -1.09
Col17a1Q07563 Gm43350-201ENSMUST00000196382 711 ntBASIC8.23□□□□□ -1.09
Col17a1Q07563 Gm2623-201ENSMUST00000199229 286 ntBASIC8.23□□□□□ -1.09
Col17a1Q07563 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC8.23□□□□□ -1.09
Col17a1Q07563 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC8.23□□□□□ -1.09
Col17a1Q07563 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC8.23□□□□□ -1.09
Col17a1Q07563 Gm6702-201ENSMUST00000208496 471 ntBASIC8.23□□□□□ -1.09
Col17a1Q07563 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC8.23□□□□□ -1.09
Col17a1Q07563 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC8.23□□□□□ -1.09
Col17a1Q07563 Gm21089-201ENSMUST00000215843 325 ntBASIC8.23□□□□□ -1.09
Col17a1Q07563 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC8.23□□□□□ -1.09
Col17a1Q07563 AC159886.1-201ENSMUST00000217099 1091 ntBASIC8.23□□□□□ -1.09
Col17a1Q07563 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC8.23□□□□□ -1.09
Col17a1Q07563 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col17a1Q07563 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Col17a1Q07563 Gm26330-201ENSMUST00000082817 104 ntBASIC8.23□□□□□ -1.09
Col17a1Q07563 AC121960.2-201ENSMUST00000227349 3446 ntBASIC8.23□□□□□ -1.09
Col17a1Q07563 Gm38070-201ENSMUST00000191850 6480 ntBASIC8.23□□□□□ -1.09
Col17a1Q07563 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col17a1Q07563 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col17a1Q07563 AC159188.2-201ENSMUST00000224103 1301 ntBASIC8.23□□□□□ -1.09
Col17a1Q07563 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col17a1Q07563 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col17a1Q07563 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
Col17a1Q07563 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col17a1Q07563 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC8.22□□□□□ -1.09
Col17a1Q07563 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Col17a1Q07563 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col17a1Q07563 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Col17a1Q07563 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Col17a1Q07563 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Col17a1Q07563 Gm25507-201ENSMUST00000116981 144 ntBASIC8.22□□□□□ -1.09
Col17a1Q07563 Gm13452-201ENSMUST00000120896 1097 ntBASIC8.22□□□□□ -1.09
Col17a1Q07563 Gm12693-201ENSMUST00000121965 483 ntBASIC8.22□□□□□ -1.09
Col17a1Q07563 Gm13487-201ENSMUST00000122240 864 ntBASIC8.22□□□□□ -1.09
Col17a1Q07563 Gm25291-201ENSMUST00000122795 144 ntBASIC8.22□□□□□ -1.09
Col17a1Q07563 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC8.22□□□□□ -1.09
Col17a1Q07563 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC8.22□□□□□ -1.09
Col17a1Q07563 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col17a1Q07563 Gm20428-201ENSMUST00000174365 283 ntBASIC8.22□□□□□ -1.09
Col17a1Q07563 Gm18356-201ENSMUST00000185677 623 ntBASIC8.22□□□□□ -1.09
Col17a1Q07563 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Col17a1Q07563 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC8.22□□□□□ -1.09
Col17a1Q07563 Gm37123-201ENSMUST00000192994 1171 ntBASIC8.22□□□□□ -1.09
Col17a1Q07563 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC8.22□□□□□ -1.09
Col17a1Q07563 AC134860.4-201ENSMUST00000223592 978 ntBASIC8.22□□□□□ -1.09
Col17a1Q07563 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Col17a1Q07563 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col17a1Q07563 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Col17a1Q07563 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC8.22□□□□□ -1.09
Col17a1Q07563 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC8.22□□□□□ -1.09
Col17a1Q07563 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Col17a1Q07563 Gm37913-201ENSMUST00000192925 2544 ntBASIC8.22□□□□□ -1.09
Col17a1Q07563 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Col17a1Q07563 AC139758.3-201ENSMUST00000226853 2704 ntBASIC8.22□□□□□ -1.09
Col17a1Q07563 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col17a1Q07563 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Col17a1Q07563 Gm43216-201ENSMUST00000196295 1333 ntBASIC8.22□□□□□ -1.09
Col17a1Q07563 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Col17a1Q07563 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC8.22□□□□□ -1.09
Col17a1Q07563 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Col17a1Q07563 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Col17a1Q07563 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Col17a1Q07563 AC144772.1-201ENSMUST00000226372 2398 ntBASIC8.21□□□□□ -1.09
Col17a1Q07563 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Col17a1Q07563 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC8.21□□□□□ -1.09
Col17a1Q07563 Gm15779-201ENSMUST00000117470 412 ntBASIC8.21□□□□□ -1.09
Col17a1Q07563 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Col17a1Q07563 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Col17a1Q07563 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Col17a1Q07563 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Col17a1Q07563 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
Col17a1Q07563 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Col17a1Q07563 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Col17a1Q07563 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Col17a1Q07563 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Col17a1Q07563 Gm37495-201ENSMUST00000194590 264 ntBASIC8.21□□□□□ -1.09
Col17a1Q07563 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms