Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Scn1bP97952 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Scn1bP97952 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm37181-201ENSMUST00000192513 1727 ntBASIC4.91□□□□□ -1.62
Scn1bP97952 Gm9519-201ENSMUST00000206108 1337 ntBASIC4.91□□□□□ -1.62
Scn1bP97952 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Scn1bP97952 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Scn1bP97952 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.91□□□□□ -1.62
Scn1bP97952 Gm5512-201ENSMUST00000218013 1353 ntBASIC4.91□□□□□ -1.62
Scn1bP97952 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Scn1bP97952 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Scn1bP97952 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Scn1bP97952 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Scn1bP97952 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC4.9□□□□□ -1.62
Scn1bP97952 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Scn1bP97952 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Scn1bP97952 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Scn1bP97952 Gm12643-201ENSMUST00000116078 374 ntBASIC4.9□□□□□ -1.63
Scn1bP97952 Gm23839-201ENSMUST00000116957 109 ntBASIC4.9□□□□□ -1.63
Scn1bP97952 Gm9432-201ENSMUST00000117810 759 ntBASIC4.9□□□□□ -1.63
Scn1bP97952 Gm13788-201ENSMUST00000120767 601 ntBASIC4.9□□□□□ -1.63
Scn1bP97952 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC4.9□□□□□ -1.63
Scn1bP97952 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Scn1bP97952 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Scn1bP97952 Gm25150-201ENSMUST00000157121 60 ntBASIC4.9□□□□□ -1.63
Scn1bP97952 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Scn1bP97952 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Scn1bP97952 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Scn1bP97952 Gm10410-201ENSMUST00000180138 384 ntBASIC4.9□□□□□ -1.63
Scn1bP97952 Gm26898-201ENSMUST00000181678 384 ntBASIC4.9□□□□□ -1.63
Scn1bP97952 Gm21542-201ENSMUST00000182307 993 ntBASIC4.9□□□□□ -1.63
Scn1bP97952 Gm29519-201ENSMUST00000186994 398 ntBASIC4.9□□□□□ -1.63
Scn1bP97952 Gm29534-201ENSMUST00000187328 382 ntBASIC4.9□□□□□ -1.63
Scn1bP97952 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC4.9□□□□□ -1.63
Scn1bP97952 Gm37189-201ENSMUST00000192131 298 ntBASIC4.9□□□□□ -1.63
Scn1bP97952 Gm2429-201ENSMUST00000194635 586 ntBASIC4.9□□□□□ -1.63
Scn1bP97952 Mirlet7e-201ENSMUST00000196737 93 ntBASIC4.9□□□□□ -1.63
Scn1bP97952 Gm43772-201ENSMUST00000202052 379 ntBASIC4.9□□□□□ -1.63
Scn1bP97952 Gm44281-201ENSMUST00000203090 166 ntBASIC4.9□□□□□ -1.63
Scn1bP97952 Gm18011-201ENSMUST00000203717 565 ntBASIC4.9□□□□□ -1.63
Scn1bP97952 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC4.9□□□□□ -1.63
Scn1bP97952 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Scn1bP97952 Gm8189-203ENSMUST00000211159 1225 ntBASIC4.9□□□□□ -1.63
Scn1bP97952 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC4.9□□□□□ -1.63
Scn1bP97952 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Scn1bP97952 Gm18043-201ENSMUST00000216741 739 ntBASIC4.9□□□□□ -1.63
Scn1bP97952 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC4.9□□□□□ -1.63
Scn1bP97952 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.9□□□□□ -1.63
Scn1bP97952 Gm6906-201ENSMUST00000218014 569 ntBASIC4.9□□□□□ -1.63
Scn1bP97952 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC4.9□□□□□ -1.63
Scn1bP97952 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Scn1bP97952 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Scn1bP97952 Gm23511-201ENSMUST00000083084 164 ntBASIC4.9□□□□□ -1.63
Scn1bP97952 Gm24454-201ENSMUST00000083349 132 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms