Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm12422-201ENSMUST00000121431 302 ntBASIC4.53□□□□□ -1.68
Nkx3-1P97436 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC4.53□□□□□ -1.68
Nkx3-1P97436 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC4.53□□□□□ -1.68
Nkx3-1P97436 Gm5699-201ENSMUST00000152491 723 ntBASIC4.53□□□□□ -1.68
Nkx3-1P97436 Gm24477-201ENSMUST00000157438 103 ntBASIC4.53□□□□□ -1.68
Nkx3-1P97436 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Nkx3-1P97436 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Nkx3-1P97436 S100a11-ps-201ENSMUST00000181735 306 ntBASIC4.53□□□□□ -1.68
Nkx3-1P97436 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC4.53□□□□□ -1.68
Nkx3-1P97436 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Nkx3-1P97436 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Nkx3-1P97436 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC4.53□□□□□ -1.68
Nkx3-1P97436 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Nkx3-1P97436 Gm45422-201ENSMUST00000211476 246 ntBASIC4.53□□□□□ -1.68
Nkx3-1P97436 AC153553.1-201ENSMUST00000218257 684 ntBASIC4.53□□□□□ -1.68
Nkx3-1P97436 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Nkx3-1P97436 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Nkx3-1P97436 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Nkx3-1P97436 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Nkx3-1P97436 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
Nkx3-1P97436 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Nkx3-1P97436 Gm37833-201ENSMUST00000194342 3256 ntBASIC4.53□□□□□ -1.68
Nkx3-1P97436 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Nkx3-1P97436 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Nkx3-1P97436 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.53□□□□□ -1.68
Nkx3-1P97436 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Nkx3-1P97436 AC162467.3-201ENSMUST00000219716 2172 ntBASIC4.53□□□□□ -1.68
Nkx3-1P97436 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.69
Nkx3-1P97436 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Nkx3-1P97436 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Nkx3-1P97436 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Nkx3-1P97436 Gm37677-201ENSMUST00000194520 7634 ntBASIC4.52□□□□□ -1.69
Nkx3-1P97436 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Nkx3-1P97436 Gm37766-201ENSMUST00000192244 2567 ntBASIC4.52□□□□□ -1.69
Nkx3-1P97436 Gm37051-201ENSMUST00000194535 2943 ntBASIC4.52□□□□□ -1.69
Nkx3-1P97436 Gm22676-201ENSMUST00000116972 129 ntBASIC4.52□□□□□ -1.69
Nkx3-1P97436 Gm12641-201ENSMUST00000117874 985 ntBASIC4.52□□□□□ -1.69
Nkx3-1P97436 Gm11200-201ENSMUST00000121698 448 ntBASIC4.52□□□□□ -1.69
Nkx3-1P97436 Gm5834-201ENSMUST00000126680 1026 ntBASIC4.52□□□□□ -1.69
Nkx3-1P97436 Gm22870-201ENSMUST00000157501 112 ntBASIC4.52□□□□□ -1.69
Nkx3-1P97436 Gm20523-201ENSMUST00000174340 1124 ntBASIC4.52□□□□□ -1.69
Nkx3-1P97436 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC4.52□□□□□ -1.69
Nkx3-1P97436 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC4.52□□□□□ -1.69
Nkx3-1P97436 Mir6412-201ENSMUST00000184477 97 ntBASIC4.52□□□□□ -1.69
Nkx3-1P97436 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Nkx3-1P97436 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Nkx3-1P97436 Gm9317-201ENSMUST00000197055 862 ntBASIC4.52□□□□□ -1.69
Nkx3-1P97436 Gm18791-201ENSMUST00000204611 726 ntBASIC4.52□□□□□ -1.69
Nkx3-1P97436 AC134439.1-201ENSMUST00000220923 600 ntBASIC4.52□□□□□ -1.69
Nkx3-1P97436 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC4.52□□□□□ -1.69
Nkx3-1P97436 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Nkx3-1P97436 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Nkx3-1P97436 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
Nkx3-1P97436 AC153494.1-201ENSMUST00000218664 3041 ntBASIC4.52□□□□□ -1.69
Nkx3-1P97436 Gm37018-201ENSMUST00000192441 3869 ntBASIC4.52□□□□□ -1.69
Nkx3-1P97436 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Nkx3-1P97436 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Nkx3-1P97436 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Nkx3-1P97436 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC4.51□□□□□ -1.69
Nkx3-1P97436 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
Nkx3-1P97436 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Nkx3-1P97436 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC4.51□□□□□ -1.69
Nkx3-1P97436 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Nkx3-1P97436 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Nkx3-1P97436 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.51□□□□□ -1.69
Nkx3-1P97436 Gm24117-201ENSMUST00000103973 133 ntBASIC4.51□□□□□ -1.69
Nkx3-1P97436 Gm22778-201ENSMUST00000104090 128 ntBASIC4.51□□□□□ -1.69
Nkx3-1P97436 Gm13033-201ENSMUST00000117591 1057 ntBASIC4.51□□□□□ -1.69
Nkx3-1P97436 Gm11366-201ENSMUST00000119279 429 ntBASIC4.51□□□□□ -1.69
Nkx3-1P97436 Gm14046-201ENSMUST00000119389 509 ntBASIC4.51□□□□□ -1.69
Nkx3-1P97436 Gm13213-201ENSMUST00000119668 474 ntBASIC4.51□□□□□ -1.69
Nkx3-1P97436 Gm13214-201ENSMUST00000122137 408 ntBASIC4.51□□□□□ -1.69
Nkx3-1P97436 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Nkx3-1P97436 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Nkx3-1P97436 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC4.51□□□□□ -1.69
Nkx3-1P97436 Gm23993-201ENSMUST00000157478 144 ntBASIC4.51□□□□□ -1.69
Nkx3-1P97436 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Nkx3-1P97436 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Nkx3-1P97436 Gm21909-201ENSMUST00000178260 439 ntBASIC4.51□□□□□ -1.69
Nkx3-1P97436 Gm29161-201ENSMUST00000188250 699 ntBASIC4.51□□□□□ -1.69
Nkx3-1P97436 Gm28567-201ENSMUST00000190270 693 ntBASIC4.51□□□□□ -1.69
Nkx3-1P97436 Gm37044-201ENSMUST00000193531 693 ntBASIC4.51□□□□□ -1.69
Nkx3-1P97436 Gm38369-201ENSMUST00000195101 693 ntBASIC4.51□□□□□ -1.69
Nkx3-1P97436 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Nkx3-1P97436 Gm43919-201ENSMUST00000204303 364 ntBASIC4.51□□□□□ -1.69
Nkx3-1P97436 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC4.51□□□□□ -1.69
Nkx3-1P97436 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC4.51□□□□□ -1.69
Nkx3-1P97436 AC155922.1-201ENSMUST00000220100 373 ntBASIC4.51□□□□□ -1.69
Nkx3-1P97436 AC127279.1-201ENSMUST00000220140 637 ntBASIC4.51□□□□□ -1.69
Nkx3-1P97436 Gm8672-201ENSMUST00000221200 332 ntBASIC4.51□□□□□ -1.69
Nkx3-1P97436 AC156576.2-202ENSMUST00000222525 411 ntBASIC4.51□□□□□ -1.69
Nkx3-1P97436 AV026068-220ENSMUST00000224153 1147 ntBASIC4.51□□□□□ -1.69
Nkx3-1P97436 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Nkx3-1P97436 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Nkx3-1P97436 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Nkx3-1P97436 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Nkx3-1P97436 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Nkx3-1P97436 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Nkx3-1P97436 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Nkx3-1P97436 CT025556.1-201ENSMUST00000222965 1884 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms