Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Cdh11P55288 Mir133b-201ENSMUST00000083546 119 ntBASIC4.89□□□□□ -1.63
Cdh11P55288 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Cdh11P55288 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Cdh11P55288 Gm37356-201ENSMUST00000193362 1613 ntBASIC4.89□□□□□ -1.63
Cdh11P55288 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdh11P55288 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
Cdh11P55288 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
Cdh11P55288 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdh11P55288 AC132852.1-201ENSMUST00000214683 2324 ntBASIC4.89□□□□□ -1.63
Cdh11P55288 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Cdh11P55288 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdh11P55288 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdh11P55288 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cdh11P55288 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC4.88□□□□□ -1.63
Cdh11P55288 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Cdh11P55288 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cdh11P55288 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdh11P55288 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdh11P55288 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdh11P55288 Gm25919-201ENSMUST00000104271 132 ntBASIC4.88□□□□□ -1.63
Cdh11P55288 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Cdh11P55288 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC4.88□□□□□ -1.63
Cdh11P55288 Gm23839-201ENSMUST00000116957 109 ntBASIC4.88□□□□□ -1.63
Cdh11P55288 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cdh11P55288 Gm7079-201ENSMUST00000119726 171 ntBASIC4.88□□□□□ -1.63
Cdh11P55288 Gm11483-201ENSMUST00000119839 247 ntBASIC4.88□□□□□ -1.63
Cdh11P55288 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cdh11P55288 Gm22596-201ENSMUST00000157601 316 ntBASIC4.88□□□□□ -1.63
Cdh11P55288 Gm26371-201ENSMUST00000157829 104 ntBASIC4.88□□□□□ -1.63
Cdh11P55288 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdh11P55288 Gm9294-201ENSMUST00000165198 789 ntBASIC4.88□□□□□ -1.63
Cdh11P55288 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdh11P55288 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC4.88□□□□□ -1.63
Cdh11P55288 Gm37720-201ENSMUST00000195497 1241 ntBASIC4.88□□□□□ -1.63
Cdh11P55288 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC4.88□□□□□ -1.63
Cdh11P55288 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC4.88□□□□□ -1.63
Cdh11P55288 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC4.88□□□□□ -1.63
Cdh11P55288 Gm42428-201ENSMUST00000198677 302 ntBASIC4.88□□□□□ -1.63
Cdh11P55288 Gm38670-201ENSMUST00000199248 77 ntBASIC4.88□□□□□ -1.63
Cdh11P55288 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdh11P55288 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cdh11P55288 Gm44554-201ENSMUST00000208738 147 ntBASIC4.88□□□□□ -1.63
Cdh11P55288 AC153954.2-201ENSMUST00000213811 287 ntBASIC4.88□□□□□ -1.63
Cdh11P55288 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC4.88□□□□□ -1.63
Cdh11P55288 AC123067.1-201ENSMUST00000217711 462 ntBASIC4.88□□□□□ -1.63
Cdh11P55288 Gm36501-201ENSMUST00000221857 745 ntBASIC4.88□□□□□ -1.63
Cdh11P55288 AC154583.1-201ENSMUST00000224788 655 ntBASIC4.88□□□□□ -1.63
Cdh11P55288 AC154627.3-201ENSMUST00000228441 334 ntBASIC4.88□□□□□ -1.63
Cdh11P55288 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cdh11P55288 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdh11P55288 AC144772.1-201ENSMUST00000226372 2398 ntBASIC4.88□□□□□ -1.63
Cdh11P55288 AC116726.1-201ENSMUST00000215028 3497 ntBASIC4.88□□□□□ -1.63
Cdh11P55288 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdh11P55288 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdh11P55288 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Cdh11P55288 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Cdh11P55288 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdh11P55288 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cdh11P55288 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdh11P55288 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
Cdh11P55288 Gm37780-201ENSMUST00000194117 1873 ntBASIC4.88□□□□□ -1.63
Cdh11P55288 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC4.88□□□□□ -1.63
Cdh11P55288 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Cdh11P55288 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC4.87□□□□□ -1.63
Cdh11P55288 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cdh11P55288 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdh11P55288 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Cdh11P55288 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
Cdh11P55288 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC4.87□□□□□ -1.63
Cdh11P55288 Gm45415-201ENSMUST00000209644 2074 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cdh11P55288 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cdh11P55288 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Cdh11P55288 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC4.87□□□□□ -1.63
Cdh11P55288 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdh11P55288 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC4.87□□□□□ -1.63
Cdh11P55288 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Cdh11P55288 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdh11P55288 Gm24265-201ENSMUST00000101833 141 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Cdh11P55288 Gm24230-201ENSMUST00000104313 129 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdh11P55288 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdh11P55288 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdh11P55288 Gm11984-201ENSMUST00000118142 766 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Gm14985-201ENSMUST00000118693 786 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Gm13473-201ENSMUST00000119289 367 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Gm14472-201ENSMUST00000119815 282 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Gm13533-201ENSMUST00000121104 177 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Gm12650-201ENSMUST00000121966 258 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Gm26350-201ENSMUST00000157531 288 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Gm26489-201ENSMUST00000157880 264 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Cdh11P55288 Gm22122-201ENSMUST00000175147 200 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Gm24407-201ENSMUST00000177864 141 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cdh11P55288 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC4.87□□□□□ -1.63
Cdh11P55288 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms