Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm13867-201ENSMUST00000120844 395 ntBASIC5.18□□□□□ -1.58
HttP42859 Gm7449-201ENSMUST00000194393 663 ntBASIC5.18□□□□□ -1.58
HttP42859 Gm5750-201ENSMUST00000218711 801 ntBASIC5.18□□□□□ -1.58
HttP42859 AL590503.1-201ENSMUST00000222053 321 ntBASIC5.18□□□□□ -1.58
HttP42859 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
HttP42859 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HttP42859 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HttP42859 Alms1-205ENSMUST00000213058 11163 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
HttP42859 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HttP42859 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HttP42859 Gm27189-201ENSMUST00000184119 190 ntBASIC5.18□□□□□ -1.58
HttP42859 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC5.18□□□□□ -1.58
HttP42859 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HttP42859 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
HttP42859 Plekhh1-204ENSMUST00000219956 5229 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HttP42859 Nrxn3-205ENSMUST00000163134 7922 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HttP42859 Arid1b-203ENSMUST00000115799 9888 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
HttP42859 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HttP42859 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
HttP42859 Sptbn1-201ENSMUST00000006629 8461 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
HttP42859 Mir690-201ENSMUST00000102110 109 ntBASIC5.17□□□□□ -1.58
HttP42859 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.17□□□□□ -1.58
HttP42859 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC5.17□□□□□ -1.58
HttP42859 Gm44816-201ENSMUST00000206666 477 ntBASIC5.17□□□□□ -1.58
HttP42859 AC140344.1-201ENSMUST00000223384 387 ntBASIC5.17□□□□□ -1.58
HttP42859 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HttP42859 Gm42994-201ENSMUST00000195964 2549 ntBASIC5.17□□□□□ -1.58
HttP42859 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HttP42859 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HttP42859 Muc19-202ENSMUST00000160242 9104 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HttP42859 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5.17□□□□□ -1.58
HttP42859 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HttP42859 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HttP42859 Synpr-207ENSMUST00000223583 3362 ntBASIC5.17□□□□□ -1.58
HttP42859 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
HttP42859 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HttP42859 Prickle2-203ENSMUST00000113446 7860 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HttP42859 Baz2a-201ENSMUST00000045621 8369 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
HttP42859 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.17□□□□□ -1.58
HttP42859 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
HttP42859 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
HttP42859 Gm12252-201ENSMUST00000119517 219 ntBASIC5.17□□□□□ -1.58
HttP42859 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HttP42859 Gm16259-201ENSMUST00000145241 553 ntBASIC5.17□□□□□ -1.58
HttP42859 Gm24751-201ENSMUST00000157844 102 ntBASIC5.17□□□□□ -1.58
HttP42859 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC5.17□□□□□ -1.58
HttP42859 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC5.17□□□□□ -1.58
HttP42859 Gm43814-201ENSMUST00000197851 413 ntBASIC5.17□□□□□ -1.58
HttP42859 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HttP42859 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HttP42859 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
HttP42859 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.17□□□□□ -1.58
HttP42859 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
HttP42859 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HttP42859 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
HttP42859 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
HttP42859 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
HttP42859 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
HttP42859 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HttP42859 Gm11598-201ENSMUST00000119257 357 ntBASIC5.17□□□□□ -1.58
HttP42859 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.17□□□□□ -1.58
HttP42859 Gm24507-201ENSMUST00000157683 134 ntBASIC5.17□□□□□ -1.58
HttP42859 Ang-ps2-201ENSMUST00000178173 433 ntBASIC5.17□□□□□ -1.58
HttP42859 Gm3086-202ENSMUST00000221248 310 ntBASIC5.17□□□□□ -1.58
HttP42859 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HttP42859 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
HttP42859 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
HttP42859 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HttP42859 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HttP42859 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.16□□□□□ -1.58
HttP42859 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HttP42859 Gm42819-201ENSMUST00000199630 5121 ntBASIC5.16□□□□□ -1.58
HttP42859 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HttP42859 Fam198b-201ENSMUST00000029567 6627 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HttP42859 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
HttP42859 Arid5b-204ENSMUST00000219238 7581 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HttP42859 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.16□□□□□ -1.58
HttP42859 Gm22804-201ENSMUST00000158052 101 ntBASIC5.16□□□□□ -1.58
HttP42859 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC5.16□□□□□ -1.58
HttP42859 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC5.16□□□□□ -1.58
HttP42859 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HttP42859 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
HttP42859 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.16□□□□□ -1.58
HttP42859 BC024978-201ENSMUST00000108379 7247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HttP42859 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC5.16□□□□□ -1.58
HttP42859 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
HttP42859 Pcdh15-226ENSMUST00000151116 6287 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
HttP42859 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HttP42859 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.16□□□□□ -1.58
HttP42859 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HttP42859 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
HttP42859 Gm13250-201ENSMUST00000117209 753 ntBASIC5.16□□□□□ -1.58
HttP42859 Gm14706-201ENSMUST00000117744 255 ntBASIC5.16□□□□□ -1.58
HttP42859 Gm14103-201ENSMUST00000119075 366 ntBASIC5.16□□□□□ -1.58
HttP42859 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
HttP42859 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC5.16□□□□□ -1.58
HttP42859 Gm3077-201ENSMUST00000165903 627 ntBASIC5.16□□□□□ -1.58
HttP42859 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HttP42859 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC5.16□□□□□ -1.58
HttP42859 Igkv11-118-201ENSMUST00000199448 346 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms