Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usp4P35123 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp4P35123 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Usp4P35123 Gm12057-201ENSMUST00000117244 1427 ntBASIC6.19□□□□□ -1.42
Usp4P35123 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC6.19□□□□□ -1.42
Usp4P35123 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
Usp4P35123 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp4P35123 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.19□□□□□ -1.42
Usp4P35123 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp4P35123 Gm18716-201ENSMUST00000204507 1603 ntBASIC6.19□□□□□ -1.42
Usp4P35123 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Usp4P35123 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Usp4P35123 Gm24434-201ENSMUST00000104081 132 ntBASIC6.19□□□□□ -1.42
Usp4P35123 n-R5s16-201ENSMUST00000104555 119 ntBASIC6.19□□□□□ -1.42
Usp4P35123 Gm22371-201ENSMUST00000104588 130 ntBASIC6.19□□□□□ -1.42
Usp4P35123 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usp4P35123 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Usp4P35123 Gm15185-201ENSMUST00000117397 746 ntBASIC6.19□□□□□ -1.42
Usp4P35123 Gm15781-201ENSMUST00000120216 323 ntBASIC6.19□□□□□ -1.42
Usp4P35123 Gm12890-201ENSMUST00000120885 373 ntBASIC6.19□□□□□ -1.42
Usp4P35123 Gm12317-201ENSMUST00000122307 319 ntBASIC6.19□□□□□ -1.42
Usp4P35123 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC6.19□□□□□ -1.42
Usp4P35123 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC6.19□□□□□ -1.42
Usp4P35123 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Usp4P35123 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Usp4P35123 Gm17085-201ENSMUST00000165425 502 ntBASIC6.19□□□□□ -1.42
Usp4P35123 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usp4P35123 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC6.19□□□□□ -1.42
Usp4P35123 Gm20453-201ENSMUST00000173968 226 ntBASIC6.19□□□□□ -1.42
Usp4P35123 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Usp4P35123 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Usp4P35123 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp4P35123 Gm37996-201ENSMUST00000191859 367 ntBASIC6.19□□□□□ -1.42
Usp4P35123 Gm38261-201ENSMUST00000192608 316 ntBASIC6.19□□□□□ -1.42
Usp4P35123 Gm37430-201ENSMUST00000193039 196 ntBASIC6.19□□□□□ -1.42
Usp4P35123 Ass-ps1-201ENSMUST00000197717 761 ntBASIC6.19□□□□□ -1.42
Usp4P35123 Gm42646-201ENSMUST00000202233 914 ntBASIC6.19□□□□□ -1.42
Usp4P35123 BC049739-201ENSMUST00000202626 660 ntBASIC6.19□□□□□ -1.42
Usp4P35123 AC134333.1-201ENSMUST00000204536 944 ntBASIC6.19□□□□□ -1.42
Usp4P35123 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Usp4P35123 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC6.19□□□□□ -1.42
Usp4P35123 AC151843.1-201ENSMUST00000215960 691 ntBASIC6.19□□□□□ -1.42
Usp4P35123 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC6.19□□□□□ -1.42
Usp4P35123 Gm45965-201ENSMUST00000221192 1284 ntBASIC6.19□□□□□ -1.42
Usp4P35123 Gm30738-201ENSMUST00000221346 502 ntBASIC6.19□□□□□ -1.42
Usp4P35123 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usp4P35123 CT030662.1-201ENSMUST00000227380 232 ntBASIC6.19□□□□□ -1.42
Usp4P35123 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.19□□□□□ -1.42
Usp4P35123 AC154738.7-201ENSMUST00000228606 579 ntBASIC6.19□□□□□ -1.42
Usp4P35123 Gm5229-201ENSMUST00000039375 354 ntBASIC6.19□□□□□ -1.42
Usp4P35123 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Usp4P35123 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Usp4P35123 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Usp4P35123 Gm26072-201ENSMUST00000083135 107 ntBASIC6.19□□□□□ -1.42
Usp4P35123 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Usp4P35123 n-R5s58-201ENSMUST00000093682 119 ntBASIC6.19□□□□□ -1.42
Usp4P35123 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp4P35123 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp4P35123 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usp4P35123 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp4P35123 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC6.19□□□□□ -1.42
Usp4P35123 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC6.19□□□□□ -1.42
Usp4P35123 Gm44102-201ENSMUST00000204031 1666 ntBASIC6.19□□□□□ -1.42
Usp4P35123 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC6.19□□□□□ -1.42
Usp4P35123 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp4P35123 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usp4P35123 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp4P35123 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp4P35123 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Usp4P35123 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.18□□□□□ -1.42
Usp4P35123 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
Usp4P35123 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Usp4P35123 AC156569.1-201ENSMUST00000222020 3841 ntBASIC6.18□□□□□ -1.42
Usp4P35123 Gm37356-201ENSMUST00000193362 1613 ntBASIC6.18□□□□□ -1.42
Usp4P35123 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Usp4P35123 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Usp4P35123 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Usp4P35123 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC6.18□□□□□ -1.42
Usp4P35123 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC6.18□□□□□ -1.42
Usp4P35123 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC6.18□□□□□ -1.42
Usp4P35123 Gm13194-201ENSMUST00000142299 311 ntBASIC6.18□□□□□ -1.42
Usp4P35123 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Usp4P35123 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Usp4P35123 Gm7152-201ENSMUST00000163570 605 ntBASIC6.18□□□□□ -1.42
Usp4P35123 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Usp4P35123 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC6.18□□□□□ -1.42
Usp4P35123 Gm22655-201ENSMUST00000174949 96 ntBASIC6.18□□□□□ -1.42
Usp4P35123 Gm24080-201ENSMUST00000175178 232 ntBASIC6.18□□□□□ -1.42
Usp4P35123 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC6.18□□□□□ -1.42
Usp4P35123 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC6.18□□□□□ -1.42
Usp4P35123 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Usp4P35123 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC6.18□□□□□ -1.42
Usp4P35123 Gm21241-201ENSMUST00000179551 934 ntBASIC6.18□□□□□ -1.42
Usp4P35123 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC6.18□□□□□ -1.42
Usp4P35123 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC6.18□□□□□ -1.42
Usp4P35123 Gm6055-201ENSMUST00000180532 378 ntBASIC6.18□□□□□ -1.42
Usp4P35123 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC6.18□□□□□ -1.42
Usp4P35123 Gm27225-201ENSMUST00000183833 557 ntBASIC6.18□□□□□ -1.42
Usp4P35123 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC6.18□□□□□ -1.42
Usp4P35123 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms