Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm37940-201ENSMUST00000194243 3251 ntBASIC5.79□□□□□ -1.48
Col2a1P28481 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC5.79□□□□□ -1.48
Col2a1P28481 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC5.79□□□□□ -1.48
Col2a1P28481 S100a11-ps-201ENSMUST00000181735 306 ntBASIC5.79□□□□□ -1.48
Col2a1P28481 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col2a1P28481 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col2a1P28481 Gm28957-201ENSMUST00000190174 373 ntBASIC5.79□□□□□ -1.48
Col2a1P28481 Gm29332-201ENSMUST00000190829 227 ntBASIC5.79□□□□□ -1.48
Col2a1P28481 Gm10292-202ENSMUST00000193165 585 ntBASIC5.79□□□□□ -1.48
Col2a1P28481 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.79□□□□□ -1.48
Col2a1P28481 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col2a1P28481 Gm43136-201ENSMUST00000200403 636 ntBASIC5.79□□□□□ -1.48
Col2a1P28481 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.79□□□□□ -1.48
Col2a1P28481 Gm43968-201ENSMUST00000203388 389 ntBASIC5.79□□□□□ -1.48
Col2a1P28481 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col2a1P28481 CT954323.2-201ENSMUST00000222056 213 ntBASIC5.79□□□□□ -1.48
Col2a1P28481 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col2a1P28481 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col2a1P28481 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col2a1P28481 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.79□□□□□ -1.48
Col2a1P28481 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.79□□□□□ -1.48
Col2a1P28481 Gm42598-201ENSMUST00000200110 2437 ntBASIC5.79□□□□□ -1.48
Col2a1P28481 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.79□□□□□ -1.48
Col2a1P28481 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col2a1P28481 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.79□□□□□ -1.48
Col2a1P28481 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
Col2a1P28481 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col2a1P28481 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.79□□□□□ -1.48
Col2a1P28481 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col2a1P28481 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Col2a1P28481 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC5.78□□□□□ -1.48
Col2a1P28481 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col2a1P28481 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col2a1P28481 Gm15772-201ENSMUST00000118533 438 ntBASIC5.78□□□□□ -1.48
Col2a1P28481 Gm13503-201ENSMUST00000119017 446 ntBASIC5.78□□□□□ -1.48
Col2a1P28481 Gm9085-201ENSMUST00000119994 1072 ntBASIC5.78□□□□□ -1.48
Col2a1P28481 Gm15168-201ENSMUST00000121057 316 ntBASIC5.78□□□□□ -1.48
Col2a1P28481 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col2a1P28481 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col2a1P28481 Gm28503-201ENSMUST00000185966 147 ntBASIC5.78□□□□□ -1.48
Col2a1P28481 Gm18150-201ENSMUST00000195341 645 ntBASIC5.78□□□□□ -1.48
Col2a1P28481 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col2a1P28481 Gm32308-201ENSMUST00000203053 280 ntBASIC5.78□□□□□ -1.48
Col2a1P28481 Gm44237-201ENSMUST00000205183 936 ntBASIC5.78□□□□□ -1.48
Col2a1P28481 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col2a1P28481 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col2a1P28481 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.78□□□□□ -1.48
Col2a1P28481 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
Col2a1P28481 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Col2a1P28481 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Col2a1P28481 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col2a1P28481 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Col2a1P28481 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col2a1P28481 Gm45516-201ENSMUST00000211588 4182 ntBASIC5.78□□□□□ -1.48
Col2a1P28481 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col2a1P28481 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col2a1P28481 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col2a1P28481 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.78□□□□□ -1.48
Col2a1P28481 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col2a1P28481 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Col2a1P28481 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.78□□□□□ -1.48
Col2a1P28481 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col2a1P28481 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC5.78□□□□□ -1.48
Col2a1P28481 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col2a1P28481 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col2a1P28481 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col2a1P28481 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.77□□□□□ -1.48
Col2a1P28481 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
Col2a1P28481 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.48
Col2a1P28481 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5.77□□□□□ -1.49
Col2a1P28481 Gm15170-201ENSMUST00000121593 2023 ntBASIC5.77□□□□□ -1.49
Col2a1P28481 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col2a1P28481 Gm12073-201ENSMUST00000117382 524 ntBASIC5.77□□□□□ -1.49
Col2a1P28481 Gm23673-201ENSMUST00000157474 298 ntBASIC5.77□□□□□ -1.49
Col2a1P28481 Gm26034-201ENSMUST00000158154 116 ntBASIC5.77□□□□□ -1.49
Col2a1P28481 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Col2a1P28481 AC174780.1-201ENSMUST00000199415 1107 ntBASIC5.77□□□□□ -1.49
Col2a1P28481 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.77□□□□□ -1.49
Col2a1P28481 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC5.77□□□□□ -1.49
Col2a1P28481 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC5.77□□□□□ -1.49
Col2a1P28481 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC5.77□□□□□ -1.49
Col2a1P28481 AC154724.1-201ENSMUST00000225782 821 ntBASIC5.77□□□□□ -1.49
Col2a1P28481 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
Col2a1P28481 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col2a1P28481 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.77□□□□□ -1.49
Col2a1P28481 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.77□□□□□ -1.49
Col2a1P28481 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.77□□□□□ -1.49
Col2a1P28481 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.77□□□□□ -1.49
Col2a1P28481 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col2a1P28481 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Col2a1P28481 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
Col2a1P28481 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col2a1P28481 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col2a1P28481 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col2a1P28481 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC5.77□□□□□ -1.49
Col2a1P28481 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.77□□□□□ -1.49
Col2a1P28481 Gm16463-201ENSMUST00000120527 721 ntBASIC5.77□□□□□ -1.49
Col2a1P28481 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC5.77□□□□□ -1.49
Col2a1P28481 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC5.77□□□□□ -1.49
Col2a1P28481 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms