Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Sdc1P18828 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Sdc1P18828 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
Sdc1P18828 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
Sdc1P18828 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
Sdc1P18828 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Sdc1P18828 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Sdc1P18828 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Sdc1P18828 AC151904.4-201ENSMUST00000219868 1319 ntBASIC4.18□□□□□ -1.74
Sdc1P18828 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC4.18□□□□□ -1.74
Sdc1P18828 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Sdc1P18828 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Sdc1P18828 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Sdc1P18828 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Sdc1P18828 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Sdc1P18828 Gm37221-201ENSMUST00000194472 3007 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Sdc1P18828 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
Sdc1P18828 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Sdc1P18828 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Sdc1P18828 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 Gm11325-201ENSMUST00000119967 469 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 Gm16200-201ENSMUST00000120385 331 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Sdc1P18828 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Sdc1P18828 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Sdc1P18828 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC4.17□□□□□ -1.74
Sdc1P18828 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC4.17□□□□□ -1.74
Sdc1P18828 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Sdc1P18828 Gm6542-201ENSMUST00000153606 772 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 Gm15812-201ENSMUST00000162331 748 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Sdc1P18828 Trbv10-201ENSMUST00000168322 289 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Sdc1P18828 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Sdc1P18828 Gm8614-201ENSMUST00000182528 978 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 Gm27754-201ENSMUST00000183340 126 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC4.17□□□□□ -1.74
Sdc1P18828 Gm27818-201ENSMUST00000184536 159 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 Gm28859-201ENSMUST00000186650 616 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC4.17□□□□□ -1.74
Sdc1P18828 Gm28974-201ENSMUST00000187893 231 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Sdc1P18828 Gm17953-201ENSMUST00000192061 667 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Sdc1P18828 Gm20074-201ENSMUST00000208144 484 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Sdc1P18828 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC4.17□□□□□ -1.74
Sdc1P18828 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC4.17□□□□□ -1.74
Sdc1P18828 Gm3266-201ENSMUST00000217832 591 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 AC124601.1-201ENSMUST00000220531 135 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 AC079644.1-201ENSMUST00000220586 405 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 Gm46996-201ENSMUST00000220924 408 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 Gm4057-201ENSMUST00000221407 368 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 AC126554.2-201ENSMUST00000223259 400 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 CT033778.1-201ENSMUST00000224767 767 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 Gm8256-203ENSMUST00000228692 591 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Sdc1P18828 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Sdc1P18828 Mir138-2-201ENSMUST00000083578 71 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Sdc1P18828 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Sdc1P18828 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Sdc1P18828 Gm43281-201ENSMUST00000202522 2704 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Sdc1P18828 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Sdc1P18828 AC103672.3-201ENSMUST00000227649 3243 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 Gm45172-201ENSMUST00000206054 1301 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Sdc1P18828 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Sdc1P18828 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.17□□□□□ -1.74
Sdc1P18828 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Sdc1P18828 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Sdc1P18828 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Sdc1P18828 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Sdc1P18828 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Sdc1P18828 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Sdc1P18828 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Sdc1P18828 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
Sdc1P18828 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Sdc1P18828 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Sdc1P18828 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Sdc1P18828 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Sdc1P18828 Gm13491-201ENSMUST00000118267 235 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 Gm13473-201ENSMUST00000119289 367 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 Gm14861-201ENSMUST00000119451 455 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 Gm14655-201ENSMUST00000120124 578 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 Gm7931-201ENSMUST00000121537 271 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 Gm24371-201ENSMUST00000122662 267 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC4.16□□□□□ -1.74
Sdc1P18828 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.16□□□□□ -1.74
Sdc1P18828 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Sdc1P18828 Gm22915-201ENSMUST00000157615 136 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms