Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm24170-201ENSMUST00000104124 133 ntBASIC5.61□□□□□ -1.51
Chmp6P0C0A3 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Gm15185-201ENSMUST00000117397 746 ntBASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Gm12683-201ENSMUST00000117528 415 ntBASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Gm15034-201ENSMUST00000120043 349 ntBASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Gm17014-201ENSMUST00000120765 168 ntBASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Gm4831-201ENSMUST00000174626 594 ntBASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Gm18177-201ENSMUST00000188373 404 ntBASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Gm42428-201ENSMUST00000198677 302 ntBASIC5.61□□□□□ -1.51
Chmp6P0C0A3 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC5.61□□□□□ -1.51
Chmp6P0C0A3 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.61□□□□□ -1.51
Chmp6P0C0A3 AC123658.1-201ENSMUST00000228364 867 ntBASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Gm23456-201ENSMUST00000083335 137 ntBASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Gm14520-201ENSMUST00000119258 387 ntBASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Gm26350-201ENSMUST00000157531 288 ntBASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Gm10319-202ENSMUST00000159439 846 ntBASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Gm3307-201ENSMUST00000176164 632 ntBASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Gm10784-201ENSMUST00000178715 238 ntBASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Gm27266-201ENSMUST00000184521 123 ntBASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Gm18350-201ENSMUST00000187395 955 ntBASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Gm44319-201ENSMUST00000196974 93 ntBASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Gm19196-201ENSMUST00000209258 357 ntBASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.6□□□□□ -1.51
Chmp6P0C0A3 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Gm9386-201ENSMUST00000095195 381 ntBASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Chmp6P0C0A3 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Chmp6P0C0A3 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Chmp6P0C0A3 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.59□□□□□ -1.51
Chmp6P0C0A3 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Chmp6P0C0A3 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Chmp6P0C0A3 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.59□□□□□ -1.51
Chmp6P0C0A3 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Chmp6P0C0A3 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.59□□□□□ -1.51
Chmp6P0C0A3 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Chmp6P0C0A3 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Chmp6P0C0A3 Gm22273-201ENSMUST00000104040 132 ntBASIC5.59□□□□□ -1.51
Chmp6P0C0A3 Gm16205-201ENSMUST00000117720 1027 ntBASIC5.59□□□□□ -1.51
Chmp6P0C0A3 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC5.59□□□□□ -1.51
Chmp6P0C0A3 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Chmp6P0C0A3 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Chmp6P0C0A3 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Chmp6P0C0A3 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.59□□□□□ -1.51
Chmp6P0C0A3 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC5.59□□□□□ -1.51
Chmp6P0C0A3 Mir7020-201ENSMUST00000183787 70 ntBASIC5.59□□□□□ -1.51
Chmp6P0C0A3 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC5.59□□□□□ -1.51
Chmp6P0C0A3 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC5.59□□□□□ -1.51
Chmp6P0C0A3 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Chmp6P0C0A3 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC5.59□□□□□ -1.51
Chmp6P0C0A3 Gm8719-201ENSMUST00000203602 534 ntBASIC5.59□□□□□ -1.51
Chmp6P0C0A3 Gm44795-201ENSMUST00000205496 319 ntBASIC5.59□□□□□ -1.51
Chmp6P0C0A3 Gm45185-201ENSMUST00000207556 404 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms