Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm5185-201ENSMUST00000080271 619 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm23846-201ENSMUST00000083835 107 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm37725-201ENSMUST00000193965 2125 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 AC120375.1-201ENSMUST00000227034 3612 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm26384-201ENSMUST00000102183 110 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Rnu11-201ENSMUST00000104135 134 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm25415-201ENSMUST00000104220 132 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm22103-201ENSMUST00000116733 121 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm26475-201ENSMUST00000116769 121 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm23620-201ENSMUST00000116812 121 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm25042-201ENSMUST00000116856 121 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm25540-201ENSMUST00000116880 121 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm11821-201ENSMUST00000117335 979 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm15766-201ENSMUST00000118025 813 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm14794-201ENSMUST00000118181 192 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm12102-201ENSMUST00000118251 604 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm12535-201ENSMUST00000121025 484 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 n-R5s207-201ENSMUST00000122497 118 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm26321-201ENSMUST00000157740 242 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm22701-201ENSMUST00000175371 291 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm23550-201ENSMUST00000179003 121 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm25123-201ENSMUST00000179154 121 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm26365-201ENSMUST00000179177 94 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm25353-201ENSMUST00000179366 121 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm22992-201ENSMUST00000179496 121 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm25892-201ENSMUST00000179867 121 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm24092-201ENSMUST00000180257 121 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm28973-201ENSMUST00000189310 613 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Ighv1-10-201ENSMUST00000194372 355 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm38041-201ENSMUST00000194445 661 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm43772-201ENSMUST00000202052 379 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm44896-201ENSMUST00000206190 772 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 AC161456.1-201ENSMUST00000206771 887 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm18774-201ENSMUST00000218269 601 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 CT030645.2-201ENSMUST00000224321 1012 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 AC161275.1-201ENSMUST00000224668 208 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 AC137871.2-201ENSMUST00000226482 289 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 AC154806.4-201ENSMUST00000227406 439 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 AC119573.1-201ENSMUST00000227960 757 ntBASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Pcdh1F7BJK1 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms