Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Gm8317-201ENSMUST00000121261 471 ntBASIC5.9□□□□□ -1.46
Clip3B9EHT4 Gm15388-201ENSMUST00000121578 726 ntBASIC5.9□□□□□ -1.46
Clip3B9EHT4 Gm15488-201ENSMUST00000121682 670 ntBASIC5.9□□□□□ -1.46
Clip3B9EHT4 Gm11344-201ENSMUST00000122011 335 ntBASIC5.9□□□□□ -1.46
Clip3B9EHT4 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Clip3B9EHT4 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC5.9□□□□□ -1.46
Clip3B9EHT4 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC5.9□□□□□ -1.46
Clip3B9EHT4 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC5.9□□□□□ -1.46
Clip3B9EHT4 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Clip3B9EHT4 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Clip3B9EHT4 Gm24733-201ENSMUST00000158863 253 ntBASIC5.9□□□□□ -1.46
Clip3B9EHT4 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Clip3B9EHT4 Ear-ps7-201ENSMUST00000161287 442 ntBASIC5.9□□□□□ -1.46
Clip3B9EHT4 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC5.9□□□□□ -1.46
Clip3B9EHT4 Gm2877-201ENSMUST00000178248 1204 ntBASIC5.9□□□□□ -1.46
Clip3B9EHT4 Gm23450-201ENSMUST00000178285 91 ntBASIC5.9□□□□□ -1.46
Clip3B9EHT4 Gm8324-201ENSMUST00000178911 1204 ntBASIC5.9□□□□□ -1.46
Clip3B9EHT4 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Clip3B9EHT4 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC5.9□□□□□ -1.46
Clip3B9EHT4 Gm28885-201ENSMUST00000185615 563 ntBASIC5.9□□□□□ -1.46
Clip3B9EHT4 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC5.9□□□□□ -1.46
Clip3B9EHT4 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Clip3B9EHT4 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.9□□□□□ -1.46
Clip3B9EHT4 Gm45196-201ENSMUST00000206751 825 ntBASIC5.9□□□□□ -1.46
Clip3B9EHT4 Gm18467-201ENSMUST00000208805 434 ntBASIC5.9□□□□□ -1.46
Clip3B9EHT4 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.9□□□□□ -1.46
Clip3B9EHT4 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.9□□□□□ -1.46
Clip3B9EHT4 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.9□□□□□ -1.46
Clip3B9EHT4 AC132384.8-201ENSMUST00000218152 1204 ntBASIC5.9□□□□□ -1.46
Clip3B9EHT4 AC166574.3-201ENSMUST00000226725 367 ntBASIC5.9□□□□□ -1.46
Clip3B9EHT4 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Clip3B9EHT4 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Clip3B9EHT4 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Clip3B9EHT4 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Clip3B9EHT4 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Clip3B9EHT4 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Clip3B9EHT4 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Clip3B9EHT4 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Clip3B9EHT4 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Clip3B9EHT4 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Clip3B9EHT4 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC5.9□□□□□ -1.47
Clip3B9EHT4 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Clip3B9EHT4 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Clip3B9EHT4 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Clip3B9EHT4 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Clip3B9EHT4 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.9□□□□□ -1.47
Clip3B9EHT4 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Clip3B9EHT4 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Clip3B9EHT4 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Clip3B9EHT4 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Clip3B9EHT4 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.47
Clip3B9EHT4 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
Clip3B9EHT4 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Clip3B9EHT4 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.9□□□□□ -1.47
Clip3B9EHT4 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Clip3B9EHT4 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Clip3B9EHT4 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC5.89□□□□□ -1.47
Clip3B9EHT4 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Clip3B9EHT4 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Clip3B9EHT4 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Clip3B9EHT4 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Clip3B9EHT4 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Clip3B9EHT4 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Clip3B9EHT4 Gm37864-201ENSMUST00000195308 3075 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Clip3B9EHT4 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Clip3B9EHT4 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Clip3B9EHT4 Gm12040-201ENSMUST00000118357 537 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 Gm7421-201ENSMUST00000119298 639 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 Gm7365-201ENSMUST00000120877 639 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 Gm14600-201ENSMUST00000121032 630 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 Gm15237-201ENSMUST00000122104 469 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 Defa-ps12-201ENSMUST00000122353 193 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 Gm15367-201ENSMUST00000122398 1016 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 Gm23111-201ENSMUST00000122652 105 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Clip3B9EHT4 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
Clip3B9EHT4 Gm17655-201ENSMUST00000167969 255 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 Zfp950-206ENSMUST00000178819 171 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Clip3B9EHT4 Gm37265-201ENSMUST00000191698 885 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 Gm37578-201ENSMUST00000192256 1177 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 Gm37433-201ENSMUST00000192695 678 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 Gm37784-201ENSMUST00000193233 189 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 Gm37441-201ENSMUST00000194430 678 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 Gm43005-201ENSMUST00000199015 648 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 Gm7166-201ENSMUST00000199715 303 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC5.89□□□□□ -1.47
Clip3B9EHT4 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC5.89□□□□□ -1.47
Clip3B9EHT4 AC152979.4-201ENSMUST00000219893 379 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 Gm17820-201ENSMUST00000220213 1068 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 Gm9088-201ENSMUST00000220237 508 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 Gm7557-201ENSMUST00000221935 865 ntBASIC5.89□□□□□ -1.47
Clip3B9EHT4 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC5.89□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 147.7 ms