Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm45697-201ENSMUST00000212893 2876 ntBASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm16456-201ENSMUST00000174431 920 ntBASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm8993-201ENSMUST00000182182 983 ntBASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Mir7222-201ENSMUST00000183740 75 ntBASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm10292-202ENSMUST00000193165 585 ntBASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm4602-201ENSMUST00000203198 308 ntBASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm45651-201ENSMUST00000210857 335 ntBASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm5750-201ENSMUST00000218711 801 ntBASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 AC137961.1-201ENSMUST00000227924 734 ntBASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm38368-201ENSMUST00000193181 1335 ntBASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm37248-201ENSMUST00000193576 3174 ntBASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm25907-201ENSMUST00000158486 125 ntBASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm20701-201ENSMUST00000176082 347 ntBASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm21070-201ENSMUST00000182425 985 ntBASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Mir3620-201ENSMUST00000184710 61 ntBASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm19617-201ENSMUST00000202977 308 ntBASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 AC168881.1-201ENSMUST00000226018 430 ntBASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col4a6B1AVK5 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Col4a6B1AVK5 AC160028.2-201ENSMUST00000218937 2519 ntBASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col4a6B1AVK5 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Gm37181-201ENSMUST00000192513 1727 ntBASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col4a6B1AVK5 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col4a6B1AVK5 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Gm23837-201ENSMUST00000122656 286 ntBASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Gm27688-201ENSMUST00000183634 91 ntBASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Gm5734-201ENSMUST00000189787 913 ntBASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Gm18382-201ENSMUST00000194394 582 ntBASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.27□□□□□ -1.57
Col4a6B1AVK5 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.27□□□□□ -1.57
Col4a6B1AVK5 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Gm24031-201ENSMUST00000083930 131 ntBASIC5.27□□□□□ -1.57
Col4a6B1AVK5 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms