Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a4A2AX52 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a4A2AX52 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a4A2AX52 AC120375.1-201ENSMUST00000227034 3612 ntBASIC4.29□□□□□ -1.72
Col6a4A2AX52 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a4A2AX52 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Col6a4A2AX52 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a4A2AX52 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC4.29□□□□□ -1.72
Col6a4A2AX52 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Col6a4A2AX52 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a4A2AX52 Gm13567-201ENSMUST00000118026 247 ntBASIC4.29□□□□□ -1.72
Col6a4A2AX52 Gm7312-201ENSMUST00000118798 469 ntBASIC4.29□□□□□ -1.72
Col6a4A2AX52 Gm7363-201ENSMUST00000119883 399 ntBASIC4.29□□□□□ -1.72
Col6a4A2AX52 Gm17014-201ENSMUST00000120765 168 ntBASIC4.29□□□□□ -1.72
Col6a4A2AX52 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a4A2AX52 Gm27528-201ENSMUST00000183544 205 ntBASIC4.29□□□□□ -1.72
Col6a4A2AX52 Gm2497-201ENSMUST00000189539 601 ntBASIC4.29□□□□□ -1.72
Col6a4A2AX52 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.29□□□□□ -1.72
Col6a4A2AX52 Gm44650-201ENSMUST00000206929 194 ntBASIC4.29□□□□□ -1.72
Col6a4A2AX52 Gm45236-201ENSMUST00000208632 229 ntBASIC4.29□□□□□ -1.72
Col6a4A2AX52 Gm19096-201ENSMUST00000209705 766 ntBASIC4.29□□□□□ -1.72
Col6a4A2AX52 Gm3816-201ENSMUST00000209803 433 ntBASIC4.29□□□□□ -1.72
Col6a4A2AX52 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Col6a4A2AX52 Gm18618-201ENSMUST00000222211 473 ntBASIC4.29□□□□□ -1.72
Col6a4A2AX52 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a4A2AX52 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
Col6a4A2AX52 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a4A2AX52 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.29□□□□□ -1.72
Col6a4A2AX52 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col6a4A2AX52 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a4A2AX52 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Col6a4A2AX52 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
Col6a4A2AX52 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col6a4A2AX52 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col6a4A2AX52 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.28□□□□□ -1.72
Col6a4A2AX52 Gm12520-201ENSMUST00000117493 316 ntBASIC4.28□□□□□ -1.72
Col6a4A2AX52 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC4.28□□□□□ -1.72
Col6a4A2AX52 Mir6416-201ENSMUST00000183664 117 ntBASIC4.28□□□□□ -1.72
Col6a4A2AX52 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC4.28□□□□□ -1.72
Col6a4A2AX52 Gm42776-201ENSMUST00000198031 406 ntBASIC4.28□□□□□ -1.72
Col6a4A2AX52 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC4.28□□□□□ -1.72
Col6a4A2AX52 AC164597.1-201ENSMUST00000226538 514 ntBASIC4.28□□□□□ -1.72
Col6a4A2AX52 Gm5045-201ENSMUST00000027054 810 ntBASIC4.28□□□□□ -1.72
Col6a4A2AX52 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC4.28□□□□□ -1.72
Col6a4A2AX52 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a4A2AX52 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC4.28□□□□□ -1.72
Col6a4A2AX52 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a4A2AX52 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a4A2AX52 Gm44695-201ENSMUST00000205567 1631 ntBASIC4.28□□□□□ -1.72
Col6a4A2AX52 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Col6a4A2AX52 Gm37278-201ENSMUST00000191619 2872 ntBASIC4.28□□□□□ -1.72
Col6a4A2AX52 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.28□□□□□ -1.72
Col6a4A2AX52 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a4A2AX52 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a4A2AX52 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a4A2AX52 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a4A2AX52 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC4.28□□□□□ -1.72
Col6a4A2AX52 Gm20549-201ENSMUST00000174804 429 ntBASIC4.28□□□□□ -1.72
Col6a4A2AX52 Mir6960-201ENSMUST00000183449 61 ntBASIC4.28□□□□□ -1.72
Col6a4A2AX52 Gm4854-201ENSMUST00000185902 574 ntBASIC4.28□□□□□ -1.72
Col6a4A2AX52 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a4A2AX52 Gm5734-201ENSMUST00000189787 913 ntBASIC4.28□□□□□ -1.72
Col6a4A2AX52 Gm43370-201ENSMUST00000196437 284 ntBASIC4.28□□□□□ -1.72
Col6a4A2AX52 Gm19617-201ENSMUST00000202977 308 ntBASIC4.28□□□□□ -1.72
Col6a4A2AX52 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.28□□□□□ -1.72
Col6a4A2AX52 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Col6a4A2AX52 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Col6a4A2AX52 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Col6a4A2AX52 Gm45632-201ENSMUST00000211532 1888 ntBASIC4.28□□□□□ -1.72
Col6a4A2AX52 Gm38372-201ENSMUST00000194854 4028 ntBASIC4.28□□□□□ -1.72
Col6a4A2AX52 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a4A2AX52 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a4A2AX52 AC137871.4-201ENSMUST00000226323 3901 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm45001-201ENSMUST00000208279 2515 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm10727-201ENSMUST00000197107 1602 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col6a4A2AX52 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm24170-201ENSMUST00000104124 133 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm4852-201ENSMUST00000121202 729 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
Col6a4A2AX52 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm8614-201ENSMUST00000182528 978 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm4832-201ENSMUST00000182679 399 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm18864-201ENSMUST00000194518 1051 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm8861-201ENSMUST00000196346 832 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm8891-201ENSMUST00000198546 832 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm43436-201ENSMUST00000199308 147 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm8719-201ENSMUST00000203602 534 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
Col6a4A2AX52 AC161252.2-201ENSMUST00000224978 374 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 AC074315.1-201ENSMUST00000228801 214 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Col6a4A2AX52 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a4A2AX52 AC093022.3-201ENSMUST00000226569 1926 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a4A2AX52 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a4A2AX52 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm42676-201ENSMUST00000197609 2686 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms