Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Gm45424-201ENSMUST00000210575 3300 ntBASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Mir6963-201ENSMUST00000183535 71 ntBASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Gm27690-201ENSMUST00000184596 126 ntBASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Gm4412-201ENSMUST00000186660 433 ntBASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Gm43237-201ENSMUST00000196835 1044 ntBASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Gm4290-201ENSMUST00000206897 814 ntBASIC5.64□□□□□ -1.51
Scn3aA2ASI5 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Gm7045-201ENSMUST00000221466 605 ntBASIC5.64□□□□□ -1.51
Scn3aA2ASI5 AC154527.3-201ENSMUST00000225519 989 ntBASIC5.64□□□□□ -1.51
Scn3aA2ASI5 CT009600.2-201ENSMUST00000226638 481 ntBASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Gm43577-201ENSMUST00000197090 3344 ntBASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Scn3aA2ASI5 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Scn3aA2ASI5 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Scn3aA2ASI5 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Scn3aA2ASI5 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Scn3aA2ASI5 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Scn3aA2ASI5 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.63□□□□□ -1.51
Scn3aA2ASI5 Gm44668-201ENSMUST00000207911 3265 ntBASIC5.63□□□□□ -1.51
Scn3aA2ASI5 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Scn3aA2ASI5 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Scn3aA2ASI5 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Scn3aA2ASI5 Gm12466-201ENSMUST00000121199 620 ntBASIC5.63□□□□□ -1.51
Scn3aA2ASI5 Gm22343-201ENSMUST00000122648 286 ntBASIC5.63□□□□□ -1.51
Scn3aA2ASI5 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Scn3aA2ASI5 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Scn3aA2ASI5 Gm29086-201ENSMUST00000186774 222 ntBASIC5.63□□□□□ -1.51
Scn3aA2ASI5 Gm29085-201ENSMUST00000187108 225 ntBASIC5.63□□□□□ -1.51
Scn3aA2ASI5 Gm18100-201ENSMUST00000200897 452 ntBASIC5.63□□□□□ -1.51
Scn3aA2ASI5 Gm5373-201ENSMUST00000212113 1050 ntBASIC5.63□□□□□ -1.51
Scn3aA2ASI5 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Scn3aA2ASI5 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Scn3aA2ASI5 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Scn3aA2ASI5 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Scn3aA2ASI5 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.63□□□□□ -1.51
Scn3aA2ASI5 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Scn3aA2ASI5 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Scn3aA2ASI5 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Scn3aA2ASI5 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Gm43843-201ENSMUST00000202396 1587 ntBASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scn3aA2ASI5 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Gm14756-201ENSMUST00000116395 240 ntBASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Gm12717-201ENSMUST00000118427 983 ntBASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Gm24685-201ENSMUST00000157764 285 ntBASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Scn3aA2ASI5 S100a11-ps-201ENSMUST00000181735 306 ntBASIC5.62□□□□□ -1.51
Scn3aA2ASI5 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC5.62□□□□□ -1.51
Scn3aA2ASI5 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Gm44603-201ENSMUST00000206820 367 ntBASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Scn3aA2ASI5 AC154724.1-201ENSMUST00000225782 821 ntBASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Gm21856-201ENSMUST00000187547 696 ntBASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Gm21735-201ENSMUST00000190360 696 ntBASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Gm20056-201ENSMUST00000194813 519 ntBASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Gm43390-201ENSMUST00000196614 421 ntBASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Gm42663-201ENSMUST00000199883 351 ntBASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Gm2622-201ENSMUST00000200018 471 ntBASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Gm8719-201ENSMUST00000203602 534 ntBASIC5.62□□□□□ -1.51
Scn3aA2ASI5 AC138284.2-201ENSMUST00000213982 567 ntBASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC5.62□□□□□ -1.51
Scn3aA2ASI5 AC131117.2-203ENSMUST00000225886 950 ntBASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Gm5715-201ENSMUST00000196854 1465 ntBASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scn3aA2ASI5 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scn3aA2ASI5 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Scn3aA2ASI5 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Gm2080-201ENSMUST00000211299 1573 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 129.8 ms