Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Trim3Q9R1R2 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Trim3Q9R1R2 LOC102637012-201ENSMUST00000217248 2562 ntBASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Gm6134-201ENSMUST00000117265 171 ntBASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Gm15074-201ENSMUST00000117603 936 ntBASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Gm3931-201ENSMUST00000119038 455 ntBASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Gm12650-201ENSMUST00000121966 258 ntBASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Gm17142-201ENSMUST00000164933 645 ntBASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Trim3Q9R1R2 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Mir6539-201ENSMUST00000183732 110 ntBASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC4.99□□□□□ -1.61
Trim3Q9R1R2 AC110381.1-201ENSMUST00000218987 586 ntBASIC4.99□□□□□ -1.61
Trim3Q9R1R2 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC4.99□□□□□ -1.61
Trim3Q9R1R2 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Trim3Q9R1R2 AC144772.1-201ENSMUST00000226372 2398 ntBASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Trim3Q9R1R2 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Gm29112-201ENSMUST00000188962 3487 ntBASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Abcc2-202ENSMUST00000099413 1926 ntBASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Gm12245-201ENSMUST00000117266 357 ntBASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Gm12074-201ENSMUST00000120189 219 ntBASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Gm23250-201ENSMUST00000157444 267 ntBASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Mir6971-201ENSMUST00000183497 63 ntBASIC4.98□□□□□ -1.61
Trim3Q9R1R2 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Gm9332-201ENSMUST00000198431 730 ntBASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Gm44673-201ENSMUST00000205692 996 ntBASIC4.98□□□□□ -1.61
Trim3Q9R1R2 AC155266.1-201ENSMUST00000220762 904 ntBASIC4.98□□□□□ -1.61
Trim3Q9R1R2 AC154806.3-201ENSMUST00000227376 439 ntBASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 AC153959.1-201ENSMUST00000213617 1694 ntBASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trim3Q9R1R2 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.97□□□□□ -1.61
Trim3Q9R1R2 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC4.97□□□□□ -1.61
Trim3Q9R1R2 Gm42841-201ENSMUST00000199806 1932 ntBASIC4.97□□□□□ -1.61
Trim3Q9R1R2 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Trim3Q9R1R2 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Trim3Q9R1R2 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
Trim3Q9R1R2 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 100.8 ms