Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Sf3a3Q9D554 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.4□□□□□ -1.55
Sf3a3Q9D554 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Sf3a3Q9D554 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Sf3a3Q9D554 AC153959.1-201ENSMUST00000213617 1694 ntBASIC5.4□□□□□ -1.55
Sf3a3Q9D554 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Sf3a3Q9D554 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.4□□□□□ -1.55
Sf3a3Q9D554 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Mir706-201ENSMUST00000102262 84 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm13176-201ENSMUST00000117910 477 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm6427-201ENSMUST00000118721 979 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Mup-ps13-201ENSMUST00000120662 545 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Mup-ps1-201ENSMUST00000120720 544 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm23050-201ENSMUST00000158775 165 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm24741-201ENSMUST00000158857 106 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm26057-201ENSMUST00000178099 165 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm24417-201ENSMUST00000178123 79 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm24653-201ENSMUST00000178541 79 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm25934-201ENSMUST00000178642 79 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm7952-201ENSMUST00000180540 984 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm5734-201ENSMUST00000189787 913 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm18303-201ENSMUST00000190055 1176 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm37492-201ENSMUST00000191948 376 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm37989-201ENSMUST00000195202 803 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm9245-201ENSMUST00000200528 983 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm44856-201ENSMUST00000206639 304 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm18855-201ENSMUST00000206689 570 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm2961-201ENSMUST00000211074 772 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm20948-201ENSMUST00000211091 449 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 AC154296.3-201ENSMUST00000214427 712 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm18585-201ENSMUST00000215197 556 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 AC117797.1-201ENSMUST00000223977 695 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 AC107663.3-201ENSMUST00000225873 601 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 AC156574.2-201ENSMUST00000228023 282 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.39□□□□□ -1.55
Sf3a3Q9D554 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Sf3a3Q9D554 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sf3a3Q9D554 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Sf3a3Q9D554 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Sf3a3Q9D554 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Sf3a3Q9D554 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Sf3a3Q9D554 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.38□□□□□ -1.55
Sf3a3Q9D554 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.38□□□□□ -1.55
Sf3a3Q9D554 Gm38224-201ENSMUST00000191648 2100 ntBASIC5.38□□□□□ -1.55
Sf3a3Q9D554 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Sf3a3Q9D554 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Sf3a3Q9D554 Gm15765-201ENSMUST00000118407 910 ntBASIC5.38□□□□□ -1.55
Sf3a3Q9D554 Gm14874-201ENSMUST00000118995 438 ntBASIC5.38□□□□□ -1.55
Sf3a3Q9D554 Gm6446-201ENSMUST00000120604 818 ntBASIC5.38□□□□□ -1.55
Sf3a3Q9D554 Gm12413-201ENSMUST00000121508 312 ntBASIC5.38□□□□□ -1.55
Sf3a3Q9D554 Gm16471-201ENSMUST00000121940 618 ntBASIC5.38□□□□□ -1.55
Sf3a3Q9D554 Gm13077-201ENSMUST00000121941 484 ntBASIC5.38□□□□□ -1.55
Sf3a3Q9D554 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sf3a3Q9D554 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Sf3a3Q9D554 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC5.38□□□□□ -1.55
Sf3a3Q9D554 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sf3a3Q9D554 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC5.38□□□□□ -1.55
Sf3a3Q9D554 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Sf3a3Q9D554 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.38□□□□□ -1.55
Sf3a3Q9D554 Mir6412-201ENSMUST00000184477 97 ntBASIC5.38□□□□□ -1.55
Sf3a3Q9D554 Gm27427-201ENSMUST00000185134 193 ntBASIC5.38□□□□□ -1.55
Sf3a3Q9D554 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Sf3a3Q9D554 Gm43444-201ENSMUST00000198123 291 ntBASIC5.38□□□□□ -1.55
Sf3a3Q9D554 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Sf3a3Q9D554 Gm44281-201ENSMUST00000203090 166 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms