Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm42781-201ENSMUST00000201317 2719 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 AC154681.1-201ENSMUST00000225876 1735 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm15382-201ENSMUST00000118011 537 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm15126-201ENSMUST00000118631 833 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm12293-201ENSMUST00000121898 590 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm14162-201ENSMUST00000121985 601 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm12998-201ENSMUST00000122445 789 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Mir1900-201ENSMUST00000122714 78 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm26046-201ENSMUST00000157312 166 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm23279-201ENSMUST00000157912 97 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm23386-201ENSMUST00000158585 144 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm24080-201ENSMUST00000175178 232 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm23631-201ENSMUST00000175291 123 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm22252-201ENSMUST00000179316 79 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm24969-201ENSMUST00000180331 79 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm19206-201ENSMUST00000186401 827 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm43392-201ENSMUST00000196560 434 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm21006-201ENSMUST00000196930 667 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm36382-201ENSMUST00000198892 541 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm43979-201ENSMUST00000203179 475 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm45409-201ENSMUST00000211486 252 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 CT030195.1-201ENSMUST00000223887 378 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 CT030238.4-203ENSMUST00000227343 836 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 AC116596.2-203ENSMUST00000227345 731 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 AC154419.1-201ENSMUST00000227627 272 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm6104-201ENSMUST00000078030 603 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm23737-201ENSMUST00000082547 159 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm25403-201ENSMUST00000082971 143 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Mir325-201ENSMUST00000083491 98 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm23502-201ENSMUST00000083902 145 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm45066-201ENSMUST00000207528 2551 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm16270-201ENSMUST00000160327 3238 ntBASIC6.14□□□□□ -1.43
Ddx56Q9D0R4 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Gm25917-201ENSMUST00000104267 130 ntBASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Gm26144-201ENSMUST00000104475 132 ntBASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Gm12520-201ENSMUST00000117493 316 ntBASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Gm6884-201ENSMUST00000119318 615 ntBASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Gm15781-201ENSMUST00000120216 323 ntBASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Gm7670-201ENSMUST00000121272 641 ntBASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Gm15335-201ENSMUST00000122442 411 ntBASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Gm22818-201ENSMUST00000157446 104 ntBASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Gm25981-201ENSMUST00000157921 295 ntBASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Gm23995-201ENSMUST00000158060 129 ntBASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Gm20545-201ENSMUST00000174739 210 ntBASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Gm21809-201ENSMUST00000178495 468 ntBASIC6.13□□□□□ -1.43
Ddx56Q9D0R4 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms