Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Trim11Q99PQ2 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Trim11Q99PQ2 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
Trim11Q99PQ2 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Trim11Q99PQ2 Gm38096-201ENSMUST00000193692 2389 ntBASIC7.15□□□□□ -1.27
Trim11Q99PQ2 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Trim11Q99PQ2 Gm44045-201ENSMUST00000204906 2520 ntBASIC7.15□□□□□ -1.27
Trim11Q99PQ2 AC022775.1-201ENSMUST00000228163 2698 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm25415-201ENSMUST00000104220 132 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm13768-201ENSMUST00000116469 929 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm12565-201ENSMUST00000119004 649 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm8757-201ENSMUST00000119660 372 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm12873-201ENSMUST00000119988 422 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm6067-201ENSMUST00000121648 491 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm23885-201ENSMUST00000122682 294 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm24628-201ENSMUST00000122761 289 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm25808-201ENSMUST00000122784 284 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm25281-201ENSMUST00000157270 104 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm29460-201ENSMUST00000188607 714 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm28404-201ENSMUST00000190242 453 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm37951-201ENSMUST00000192963 3032 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm38334-201ENSMUST00000195060 313 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm42652-201ENSMUST00000199073 614 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm17906-201ENSMUST00000202480 901 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm18215-201ENSMUST00000204429 798 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm43922-201ENSMUST00000205071 328 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm6070-201ENSMUST00000207275 419 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm44697-201ENSMUST00000207756 1679 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 CT485612.3-201ENSMUST00000222179 408 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Ap3m1-208ENSMUST00000224016 764 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 AC163667.1-201ENSMUST00000225201 1289 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 AC135292.2-201ENSMUST00000227559 367 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm5321-201ENSMUST00000072050 447 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Gm24695-201ENSMUST00000083877 83 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 AC116950.1-201ENSMUST00000226322 3250 ntBASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim11Q99PQ2 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm36947-201ENSMUST00000194709 2249 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm19093-201ENSMUST00000210671 1454 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 AC151904.1-201ENSMUST00000219945 1498 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm13193-201ENSMUST00000117275 225 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm12386-201ENSMUST00000117380 688 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm14788-201ENSMUST00000119457 375 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm15502-201ENSMUST00000121449 208 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm16274-201ENSMUST00000139251 592 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm23954-201ENSMUST00000157213 353 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm23894-201ENSMUST00000158107 313 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms