Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm12077-201ENSMUST00000117049 364 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Gm15025-201ENSMUST00000118434 418 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Gm8534-201ENSMUST00000118553 766 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Gm15452-201ENSMUST00000119877 240 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Gm11472-201ENSMUST00000121305 556 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Gm15096-201ENSMUST00000121918 878 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Gm15885-201ENSMUST00000122114 388 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Gm25550-201ENSMUST00000158079 128 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Gm21614-201ENSMUST00000183260 1005 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Gm27762-201ENSMUST00000183417 109 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Gm28871-201ENSMUST00000186191 687 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Gm10193-201ENSMUST00000188288 231 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Gm18340-201ENSMUST00000196342 609 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Gm44374-201ENSMUST00000199821 140 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 AC151904.3-201ENSMUST00000219266 895 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Mylf-ps-201ENSMUST00000222174 421 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 n-R5s97-201ENSMUST00000082585 113 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Gm23452-201ENSMUST00000083327 107 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Gm36981-201ENSMUST00000192340 4485 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 AC138284.1-201ENSMUST00000214258 3236 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Gm38178-201ENSMUST00000194502 2471 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Gm44625-201ENSMUST00000207838 1561 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Gm37911-201ENSMUST00000193099 1545 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Gm10773-201ENSMUST00000218071 3935 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Gm43842-201ENSMUST00000202890 2982 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Gm43581-201ENSMUST00000196766 2864 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Gm11408-201ENSMUST00000117889 519 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Gm9308-201ENSMUST00000119073 448 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Gm13222-201ENSMUST00000119638 138 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Gm15014-201ENSMUST00000120742 258 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Gm15596-201ENSMUST00000121139 784 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Gm5383-201ENSMUST00000121177 617 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Gm15164-201ENSMUST00000122203 271 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Mir1953-201ENSMUST00000157866 89 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Gm28665-201ENSMUST00000189269 670 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Gm28996-201ENSMUST00000190316 721 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Gm3841-201ENSMUST00000191399 451 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Gm37095-201ENSMUST00000195421 205 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Trav3n-2-201ENSMUST00000197693 334 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Gm9710-201ENSMUST00000198053 499 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Trav3d-2-201ENSMUST00000199874 334 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Gm44265-201ENSMUST00000203631 465 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Gm45366-201ENSMUST00000209828 384 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Gm18891-201ENSMUST00000216734 1087 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Mir138-1-201ENSMUST00000083480 99 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Gm37107-201ENSMUST00000195326 2552 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Gm37925-201ENSMUST00000195352 4255 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 AC164567.3-201ENSMUST00000217743 2869 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Gm37332-201ENSMUST00000195853 2844 ntBASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim47Q8C0E3 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 AC135119.1-204ENSMUST00000228036 2663 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm37945-201ENSMUST00000192536 4367 ntBASIC7.36□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms