Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm42508-201ENSMUST00000199972 3292 ntBASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm25111-201ENSMUST00000116686 147 ntBASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm15126-201ENSMUST00000118631 833 ntBASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm8855-201ENSMUST00000118888 878 ntBASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm14018-201ENSMUST00000119042 455 ntBASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm7700-201ENSMUST00000120273 970 ntBASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm15750-201ENSMUST00000120970 616 ntBASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm14796-201ENSMUST00000121216 959 ntBASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm12358-201ENSMUST00000121842 520 ntBASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm14747-201ENSMUST00000149888 984 ntBASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm22841-201ENSMUST00000158443 62 ntBASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm20773-201ENSMUST00000178940 681 ntBASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm29563-201ENSMUST00000187249 496 ntBASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm9710-201ENSMUST00000198053 499 ntBASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm9173-201ENSMUST00000198054 400 ntBASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm7624-201ENSMUST00000209702 435 ntBASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 AC131720.2-201ENSMUST00000220420 431 ntBASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 AC154257.2-201ENSMUST00000224166 340 ntBASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 n-R5s97-201ENSMUST00000082585 113 ntBASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm26176-201ENSMUST00000083795 105 ntBASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm22351-201ENSMUST00000083925 107 ntBASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm24032-201ENSMUST00000083932 159 ntBASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Pcdh19Q80TF3 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Pcdh19Q80TF3 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC6.46□□□□□ -1.37
Pcdh19Q80TF3 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.46□□□□□ -1.37
Pcdh19Q80TF3 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Pcdh19Q80TF3 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
Pcdh19Q80TF3 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Pcdh19Q80TF3 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Pcdh19Q80TF3 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.46□□□□□ -1.37
Pcdh19Q80TF3 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Pcdh19Q80TF3 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Gm9226-201ENSMUST00000188352 3489 ntBASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Gm14870-201ENSMUST00000118414 156 ntBASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Gm14038-201ENSMUST00000121500 807 ntBASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Gm14935-201ENSMUST00000121528 1708 ntBASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Gm15899-201ENSMUST00000128586 238 ntBASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Gm5924-201ENSMUST00000132554 871 ntBASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Gm25185-201ENSMUST00000157754 96 ntBASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Gm26271-201ENSMUST00000158349 104 ntBASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Gm23352-201ENSMUST00000158428 64 ntBASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Gm23824-201ENSMUST00000158741 276 ntBASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Gm5929-201ENSMUST00000166883 487 ntBASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Mir6348-201ENSMUST00000183804 120 ntBASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Mir6989-201ENSMUST00000184812 65 ntBASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Gm3605-201ENSMUST00000185858 440 ntBASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Gm28404-201ENSMUST00000190242 453 ntBASIC6.46□□□□□ -1.38
Pcdh19Q80TF3 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms