Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm43390-201ENSMUST00000196614 421 ntBASIC6.41□□□□□ -1.38
Ddx55Q6ZPL9 Gm43929-201ENSMUST00000203025 409 ntBASIC6.41□□□□□ -1.38
Ddx55Q6ZPL9 Gm44988-201ENSMUST00000203835 1161 ntBASIC6.41□□□□□ -1.38
Ddx55Q6ZPL9 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC6.41□□□□□ -1.38
Ddx55Q6ZPL9 AC132384.8-201ENSMUST00000218152 1204 ntBASIC6.41□□□□□ -1.38
Ddx55Q6ZPL9 AC079644.3-201ENSMUST00000222452 357 ntBASIC6.41□□□□□ -1.38
Ddx55Q6ZPL9 Gm18247-201ENSMUST00000222937 601 ntBASIC6.41□□□□□ -1.38
Ddx55Q6ZPL9 CT030254.3-201ENSMUST00000225959 1231 ntBASIC6.41□□□□□ -1.38
Ddx55Q6ZPL9 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
Ddx55Q6ZPL9 Gm5471-201ENSMUST00000072732 337 ntBASIC6.41□□□□□ -1.38
Ddx55Q6ZPL9 Gm23511-201ENSMUST00000083084 164 ntBASIC6.41□□□□□ -1.38
Ddx55Q6ZPL9 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Ddx55Q6ZPL9 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.41□□□□□ -1.38
Ddx55Q6ZPL9 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ddx55Q6ZPL9 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ddx55Q6ZPL9 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.41□□□□□ -1.38
Ddx55Q6ZPL9 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
Ddx55Q6ZPL9 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Ddx55Q6ZPL9 Gm45322-201ENSMUST00000211642 1361 ntBASIC6.41□□□□□ -1.38
Ddx55Q6ZPL9 AC122408.2-201ENSMUST00000217901 1391 ntBASIC6.41□□□□□ -1.38
Ddx55Q6ZPL9 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Ddx55Q6ZPL9 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Ddx55Q6ZPL9 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ddx55Q6ZPL9 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.41□□□□□ -1.38
Ddx55Q6ZPL9 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Ddx55Q6ZPL9 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ddx55Q6ZPL9 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Gm42540-201ENSMUST00000200319 2008 ntBASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Mir706-201ENSMUST00000102262 84 ntBASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Gm13359-201ENSMUST00000119000 695 ntBASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Gm16471-201ENSMUST00000121940 618 ntBASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Gm23513-201ENSMUST00000158181 133 ntBASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Gm15795-201ENSMUST00000160969 553 ntBASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Gm2966-201ENSMUST00000166052 481 ntBASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Gm17204-201ENSMUST00000167936 478 ntBASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Gm22411-201ENSMUST00000175462 126 ntBASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Gm22002-201ENSMUST00000175622 125 ntBASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Mir6963-201ENSMUST00000183535 71 ntBASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Mir6398-201ENSMUST00000184541 102 ntBASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Gm29525-201ENSMUST00000189844 699 ntBASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Gm29523-201ENSMUST00000191415 699 ntBASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Gm37173-201ENSMUST00000194498 1017 ntBASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Gm45731-201ENSMUST00000211988 1203 ntBASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 AC159297.2-201ENSMUST00000219567 1075 ntBASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 AC153840.1-201ENSMUST00000219685 313 ntBASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 AC153975.1-201ENSMUST00000220087 926 ntBASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 AC140368.1-202ENSMUST00000226131 658 ntBASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 CT025525.2-201ENSMUST00000227743 423 ntBASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 CT030662.3-201ENSMUST00000228751 476 ntBASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Gm24706-201ENSMUST00000082806 137 ntBASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC6.4□□□□□ -1.38
Ddx55Q6ZPL9 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Ddx55Q6ZPL9 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ddx55Q6ZPL9 Gm44235-201ENSMUST00000204312 3058 ntBASIC6.4□□□□□ -1.39
Ddx55Q6ZPL9 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Ddx55Q6ZPL9 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ddx55Q6ZPL9 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Ddx55Q6ZPL9 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Ddx55Q6ZPL9 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ddx55Q6ZPL9 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Ddx55Q6ZPL9 Gm42645-201ENSMUST00000201573 1627 ntBASIC6.39□□□□□ -1.39
Ddx55Q6ZPL9 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Ddx55Q6ZPL9 AC132852.1-201ENSMUST00000214683 2324 ntBASIC6.39□□□□□ -1.39
Ddx55Q6ZPL9 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ddx55Q6ZPL9 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Ddx55Q6ZPL9 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.39□□□□□ -1.39
Ddx55Q6ZPL9 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ddx55Q6ZPL9 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ddx55Q6ZPL9 Gm38264-201ENSMUST00000194850 2032 ntBASIC6.39□□□□□ -1.39
Ddx55Q6ZPL9 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ddx55Q6ZPL9 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Ddx55Q6ZPL9 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ddx55Q6ZPL9 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
Ddx55Q6ZPL9 Gm23839-201ENSMUST00000116957 109 ntBASIC6.39□□□□□ -1.39
Ddx55Q6ZPL9 Gm14579-201ENSMUST00000117068 283 ntBASIC6.39□□□□□ -1.39
Ddx55Q6ZPL9 Gm12584-201ENSMUST00000117109 1105 ntBASIC6.39□□□□□ -1.39
Ddx55Q6ZPL9 Gm4914-201ENSMUST00000119757 459 ntBASIC6.39□□□□□ -1.39
Ddx55Q6ZPL9 Gm11278-201ENSMUST00000121002 997 ntBASIC6.39□□□□□ -1.39
Ddx55Q6ZPL9 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC6.39□□□□□ -1.39
Ddx55Q6ZPL9 Gm24773-201ENSMUST00000158513 99 ntBASIC6.39□□□□□ -1.39
Ddx55Q6ZPL9 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ddx55Q6ZPL9 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC6.39□□□□□ -1.39
Ddx55Q6ZPL9 Gm25534-201ENSMUST00000175365 125 ntBASIC6.39□□□□□ -1.39
Ddx55Q6ZPL9 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms