Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 n-R5s86-201ENSMUST00000083215 119 ntBASIC8.47□□□□□ -1.05
Clcn1Q64347 Gm24917-201ENSMUST00000083935 104 ntBASIC8.47□□□□□ -1.05
Clcn1Q64347 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Clcn1Q64347 AC111010.1-203ENSMUST00000227287 1548 ntBASIC8.47□□□□□ -1.05
Clcn1Q64347 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC8.47□□□□□ -1.05
Clcn1Q64347 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Clcn1Q64347 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Clcn1Q64347 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Clcn1Q64347 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC8.47□□□□□ -1.05
Clcn1Q64347 Gm42639-201ENSMUST00000197061 1871 ntBASIC8.47□□□□□ -1.05
Clcn1Q64347 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC8.47□□□□□ -1.05
Clcn1Q64347 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Clcn1Q64347 Gm4073-201ENSMUST00000176792 3500 ntBASIC8.46□□□□□ -1.05
Clcn1Q64347 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
Clcn1Q64347 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Clcn1Q64347 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Clcn1Q64347 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Clcn1Q64347 Gm43876-201ENSMUST00000203831 3229 ntBASIC8.46□□□□□ -1.06
Clcn1Q64347 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Clcn1Q64347 Gm24473-201ENSMUST00000104483 131 ntBASIC8.46□□□□□ -1.06
Clcn1Q64347 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.06
Clcn1Q64347 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Clcn1Q64347 Gm15312-201ENSMUST00000118827 271 ntBASIC8.46□□□□□ -1.06
Clcn1Q64347 Gm13503-201ENSMUST00000119017 446 ntBASIC8.46□□□□□ -1.06
Clcn1Q64347 Gm4853-201ENSMUST00000119359 394 ntBASIC8.46□□□□□ -1.06
Clcn1Q64347 Gm12222-201ENSMUST00000121368 260 ntBASIC8.46□□□□□ -1.06
Clcn1Q64347 Gm15502-201ENSMUST00000121449 208 ntBASIC8.46□□□□□ -1.06
Clcn1Q64347 Gm12807-201ENSMUST00000121546 962 ntBASIC8.46□□□□□ -1.06
Clcn1Q64347 Gm15309-201ENSMUST00000121644 240 ntBASIC8.46□□□□□ -1.06
Clcn1Q64347 Gm25970-201ENSMUST00000157165 86 ntBASIC8.46□□□□□ -1.06
Clcn1Q64347 Gm25904-201ENSMUST00000158491 143 ntBASIC8.46□□□□□ -1.06
Clcn1Q64347 Gm20453-201ENSMUST00000173968 226 ntBASIC8.46□□□□□ -1.06
Clcn1Q64347 Gm27512-201ENSMUST00000175328 126 ntBASIC8.46□□□□□ -1.06
Clcn1Q64347 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC8.46□□□□□ -1.06
Clcn1Q64347 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Clcn1Q64347 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC8.46□□□□□ -1.06
Clcn1Q64347 Mir3473f-201ENSMUST00000183743 136 ntBASIC8.46□□□□□ -1.06
Clcn1Q64347 Gm28058-201ENSMUST00000186421 264 ntBASIC8.46□□□□□ -1.06
Clcn1Q64347 Gm29105-201ENSMUST00000187256 450 ntBASIC8.46□□□□□ -1.06
Clcn1Q64347 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Clcn1Q64347 Gm28620-201ENSMUST00000190463 439 ntBASIC8.46□□□□□ -1.06
Clcn1Q64347 Gm44149-201ENSMUST00000204256 226 ntBASIC8.46□□□□□ -1.06
Clcn1Q64347 Gm4558-201ENSMUST00000207886 521 ntBASIC8.46□□□□□ -1.06
Clcn1Q64347 Gm44571-201ENSMUST00000208092 533 ntBASIC8.46□□□□□ -1.06
Clcn1Q64347 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Clcn1Q64347 Gm7530-201ENSMUST00000218466 605 ntBASIC8.46□□□□□ -1.06
Clcn1Q64347 AC113031.1-201ENSMUST00000227400 432 ntBASIC8.46□□□□□ -1.06
Clcn1Q64347 AC144798.1-201ENSMUST00000228120 391 ntBASIC8.46□□□□□ -1.06
Clcn1Q64347 AC168062.2-201ENSMUST00000228907 422 ntBASIC8.46□□□□□ -1.06
Clcn1Q64347 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Clcn1Q64347 Gm23628-201ENSMUST00000082464 173 ntBASIC8.46□□□□□ -1.06
Clcn1Q64347 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Clcn1Q64347 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Clcn1Q64347 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Clcn1Q64347 CT010577.1-202ENSMUST00000226187 1903 ntBASIC8.46□□□□□ -1.06
Clcn1Q64347 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC8.46□□□□□ -1.06
Clcn1Q64347 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Clcn1Q64347 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Clcn1Q64347 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Clcn1Q64347 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Clcn1Q64347 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Clcn1Q64347 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Clcn1Q64347 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Clcn1Q64347 Gm37685-201ENSMUST00000193507 2177 ntBASIC8.45□□□□□ -1.06
Clcn1Q64347 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Clcn1Q64347 Gm45562-201ENSMUST00000210015 1537 ntBASIC8.45□□□□□ -1.06
Clcn1Q64347 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Clcn1Q64347 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Clcn1Q64347 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Clcn1Q64347 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Clcn1Q64347 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
Clcn1Q64347 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Clcn1Q64347 Gm16394-201ENSMUST00000117289 675 ntBASIC8.45□□□□□ -1.06
Clcn1Q64347 Gm13455-201ENSMUST00000118767 517 ntBASIC8.45□□□□□ -1.06
Clcn1Q64347 Gm15791-201ENSMUST00000120365 319 ntBASIC8.45□□□□□ -1.06
Clcn1Q64347 Gm11879-201ENSMUST00000121885 702 ntBASIC8.45□□□□□ -1.06
Clcn1Q64347 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Clcn1Q64347 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC8.45□□□□□ -1.06
Clcn1Q64347 Gm20691-201ENSMUST00000176889 333 ntBASIC8.45□□□□□ -1.06
Clcn1Q64347 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC8.45□□□□□ -1.06
Clcn1Q64347 Gm17048-201ENSMUST00000179266 847 ntBASIC8.45□□□□□ -1.06
Clcn1Q64347 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Clcn1Q64347 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
Clcn1Q64347 Gm37689-201ENSMUST00000193139 275 ntBASIC8.45□□□□□ -1.06
Clcn1Q64347 Gm18009-201ENSMUST00000203239 1016 ntBASIC8.45□□□□□ -1.06
Clcn1Q64347 Gm9278-201ENSMUST00000205508 553 ntBASIC8.45□□□□□ -1.06
Clcn1Q64347 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC8.45□□□□□ -1.06
Clcn1Q64347 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC8.45□□□□□ -1.06
Clcn1Q64347 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC8.45□□□□□ -1.06
Clcn1Q64347 AC151904.3-201ENSMUST00000219266 895 ntBASIC8.45□□□□□ -1.06
Clcn1Q64347 AC164424.1-201ENSMUST00000221690 170 ntBASIC8.45□□□□□ -1.06
Clcn1Q64347 AC174797.3-202ENSMUST00000224578 587 ntBASIC8.45□□□□□ -1.06
Clcn1Q64347 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Clcn1Q64347 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Clcn1Q64347 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Clcn1Q64347 Gm43022-201ENSMUST00000197067 4268 ntBASIC8.45□□□□□ -1.06
Clcn1Q64347 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Clcn1Q64347 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
Clcn1Q64347 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Clcn1Q64347 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms