Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm22716-201ENSMUST00000177596 107 ntBASIC5.54□□□□□ -1.52
Foxc1Q61572 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Foxc1Q61572 Gm17222-201ENSMUST00000180135 847 ntBASIC5.54□□□□□ -1.52
Foxc1Q61572 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Foxc1Q61572 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC5.54□□□□□ -1.52
Foxc1Q61572 Mir8095-201ENSMUST00000185103 129 ntBASIC5.54□□□□□ -1.52
Foxc1Q61572 Gm28885-201ENSMUST00000185615 563 ntBASIC5.54□□□□□ -1.52
Foxc1Q61572 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC5.54□□□□□ -1.52
Foxc1Q61572 Gm29273-201ENSMUST00000188880 262 ntBASIC5.54□□□□□ -1.52
Foxc1Q61572 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC5.54□□□□□ -1.52
Foxc1Q61572 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Foxc1Q61572 Gm18698-201ENSMUST00000192327 668 ntBASIC5.54□□□□□ -1.52
Foxc1Q61572 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.54□□□□□ -1.52
Foxc1Q61572 Trbv9-201ENSMUST00000194494 290 ntBASIC5.54□□□□□ -1.52
Foxc1Q61572 Gm37729-201ENSMUST00000194761 1172 ntBASIC5.54□□□□□ -1.52
Foxc1Q61572 Gm37585-201ENSMUST00000195440 280 ntBASIC5.54□□□□□ -1.52
Foxc1Q61572 Gm42161-201ENSMUST00000196278 726 ntTSL 5 BASIC5.54□□□□□ -1.52
Foxc1Q61572 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Foxc1Q61572 Gm43710-201ENSMUST00000199583 452 ntBASIC5.54□□□□□ -1.52
Foxc1Q61572 Gm43812-202ENSMUST00000202701 581 ntBASIC5.54□□□□□ -1.52
Foxc1Q61572 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC5.54□□□□□ -1.52
Foxc1Q61572 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC5.54□□□□□ -1.52
Foxc1Q61572 Gm44245-201ENSMUST00000204304 232 ntBASIC5.54□□□□□ -1.52
Foxc1Q61572 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Foxc1Q61572 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC5.54□□□□□ -1.52
Foxc1Q61572 Gm19921-201ENSMUST00000210505 703 ntBASIC5.54□□□□□ -1.52
Foxc1Q61572 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC5.54□□□□□ -1.52
Foxc1Q61572 Gm18488-201ENSMUST00000215082 364 ntBASIC5.54□□□□□ -1.52
Foxc1Q61572 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Foxc1Q61572 Gm18503-201ENSMUST00000220340 728 ntBASIC5.54□□□□□ -1.52
Foxc1Q61572 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC5.54□□□□□ -1.52
Foxc1Q61572 AC154224.1-201ENSMUST00000224367 403 ntBASIC5.54□□□□□ -1.52
Foxc1Q61572 AC131117.2-202ENSMUST00000224539 547 ntBASIC5.54□□□□□ -1.52
Foxc1Q61572 CT025157.1-201ENSMUST00000226241 292 ntBASIC5.54□□□□□ -1.52
Foxc1Q61572 AC164315.1-201ENSMUST00000226452 708 ntBASIC5.54□□□□□ -1.52
Foxc1Q61572 AC154649.2-201ENSMUST00000228189 808 ntBASIC5.54□□□□□ -1.52
Foxc1Q61572 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Foxc1Q61572 Gm25699-201ENSMUST00000082896 167 ntBASIC5.54□□□□□ -1.52
Foxc1Q61572 Gm6043-201ENSMUST00000099961 492 ntBASIC5.54□□□□□ -1.52
Foxc1Q61572 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Foxc1Q61572 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Foxc1Q61572 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Foxc1Q61572 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC5.54□□□□□ -1.52
Foxc1Q61572 Gm14849-201ENSMUST00000122293 2846 ntBASIC5.54□□□□□ -1.52
Foxc1Q61572 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC5.54□□□□□ -1.52
Foxc1Q61572 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
Foxc1Q61572 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Foxc1Q61572 Gm6767-201ENSMUST00000118650 1381 ntBASIC5.54□□□□□ -1.52
Foxc1Q61572 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Foxc1Q61572 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Foxc1Q61572 Gm37056-201ENSMUST00000192141 1865 ntBASIC5.54□□□□□ -1.52
Foxc1Q61572 Gm14988-201ENSMUST00000117224 1548 ntBASIC5.53□□□□□ -1.52
Foxc1Q61572 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Foxc1Q61572 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Foxc1Q61572 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Foxc1Q61572 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Foxc1Q61572 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Foxc1Q61572 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Foxc1Q61572 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Foxc1Q61572 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Foxc1Q61572 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Foxc1Q61572 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Foxc1Q61572 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.53□□□□□ -1.52
Foxc1Q61572 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
Foxc1Q61572 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Foxc1Q61572 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC5.53□□□□□ -1.52
Foxc1Q61572 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Foxc1Q61572 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Foxc1Q61572 AC158938.1-201ENSMUST00000225372 6720 ntBASIC5.53□□□□□ -1.52
Foxc1Q61572 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Foxc1Q61572 Gm43534-201ENSMUST00000197685 2853 ntBASIC5.53□□□□□ -1.52
Foxc1Q61572 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Foxc1Q61572 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Foxc1Q61572 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Foxc1Q61572 Gm8501-201ENSMUST00000117684 432 ntBASIC5.53□□□□□ -1.52
Foxc1Q61572 Gm13880-201ENSMUST00000118421 474 ntBASIC5.53□□□□□ -1.52
Foxc1Q61572 Gm11409-201ENSMUST00000118621 403 ntBASIC5.53□□□□□ -1.52
Foxc1Q61572 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
Foxc1Q61572 Gm12632-201ENSMUST00000121223 495 ntBASIC5.53□□□□□ -1.52
Foxc1Q61572 Gm12872-201ENSMUST00000121835 320 ntBASIC5.53□□□□□ -1.52
Foxc1Q61572 Gm14129-201ENSMUST00000122436 291 ntBASIC5.53□□□□□ -1.52
Foxc1Q61572 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.53□□□□□ -1.52
Foxc1Q61572 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC5.53□□□□□ -1.52
Foxc1Q61572 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC5.53□□□□□ -1.52
Foxc1Q61572 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC5.53□□□□□ -1.52
Foxc1Q61572 Gm3362-201ENSMUST00000148102 466 ntBASIC5.53□□□□□ -1.52
Foxc1Q61572 Gm24647-201ENSMUST00000157112 113 ntBASIC5.53□□□□□ -1.52
Foxc1Q61572 Gm23538-201ENSMUST00000157535 101 ntBASIC5.53□□□□□ -1.52
Foxc1Q61572 Gm23533-201ENSMUST00000157540 245 ntBASIC5.53□□□□□ -1.52
Foxc1Q61572 Gm22597-201ENSMUST00000157602 80 ntBASIC5.53□□□□□ -1.52
Foxc1Q61572 Gm15812-201ENSMUST00000162331 748 ntBASIC5.53□□□□□ -1.52
Foxc1Q61572 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Foxc1Q61572 Gm17973-201ENSMUST00000174509 520 ntBASIC5.53□□□□□ -1.52
Foxc1Q61572 Gm25194-201ENSMUST00000177987 79 ntBASIC5.53□□□□□ -1.52
Foxc1Q61572 n-R5s115-201ENSMUST00000179019 119 ntBASIC5.53□□□□□ -1.52
Foxc1Q61572 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Foxc1Q61572 Gm27348-201ENSMUST00000184511 170 ntBASIC5.53□□□□□ -1.52
Foxc1Q61572 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC5.53□□□□□ -1.52
Foxc1Q61572 Gm28604-201ENSMUST00000186629 484 ntBASIC5.53□□□□□ -1.52
Foxc1Q61572 Gm28566-201ENSMUST00000186714 484 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms