Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm14912-201ENSMUST00000120166 1773 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm11486-201ENSMUST00000107322 478 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm22468-201ENSMUST00000116680 120 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm26248-201ENSMUST00000116700 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm26137-201ENSMUST00000116701 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm26190-201ENSMUST00000116704 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm24617-201ENSMUST00000116705 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm25778-201ENSMUST00000116713 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm25774-201ENSMUST00000116717 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm22102-201ENSMUST00000116730 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm23177-201ENSMUST00000116784 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm24193-201ENSMUST00000116801 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm24744-201ENSMUST00000116833 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm24427-201ENSMUST00000116896 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm22346-201ENSMUST00000116918 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm23606-201ENSMUST00000116938 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm22029-201ENSMUST00000116940 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm26298-201ENSMUST00000116956 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm23844-201ENSMUST00000116959 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm24484-201ENSMUST00000117009 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm25347-201ENSMUST00000117026 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm22112-201ENSMUST00000117032 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm11912-201ENSMUST00000117235 264 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm13890-201ENSMUST00000117578 390 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm2199-201ENSMUST00000119065 874 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm13121-201ENSMUST00000120637 632 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm15388-201ENSMUST00000121578 726 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm25906-201ENSMUST00000158489 126 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Mir3110-201ENSMUST00000175053 80 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm3307-201ENSMUST00000176164 632 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm22991-201ENSMUST00000178126 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm25754-201ENSMUST00000178653 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm22419-201ENSMUST00000178780 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm24802-201ENSMUST00000178897 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm25208-201ENSMUST00000178964 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm24567-201ENSMUST00000179294 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm23943-201ENSMUST00000179712 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm25228-201ENSMUST00000180121 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm23304-201ENSMUST00000180209 121 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Mir3473g-201ENSMUST00000183494 136 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm25187-201ENSMUST00000083906 133 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 AC170999.1-201ENSMUST00000226359 1585 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.5□□□□□ -1.53
Upf3bQ3ULL6 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Gm25919-201ENSMUST00000104271 132 ntBASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Gm14560-201ENSMUST00000118672 375 ntBASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 n-R5s24-201ENSMUST00000122518 117 ntBASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Upf3bQ3ULL6 Gm8358-201ENSMUST00000167222 555 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms