Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm24522-201ENSMUST00000083964 108 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Msx2Q03358 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Msx2Q03358 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Msx2Q03358 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC6.04□□□□□ -1.44
Msx2Q03358 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Msx2Q03358 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Msx2Q03358 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Msx2Q03358 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Msx2Q03358 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
Msx2Q03358 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Msx2Q03358 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Msx2Q03358 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Msx2Q03358 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Msx2Q03358 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Msx2Q03358 Gm43469-201ENSMUST00000196084 4634 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Msx2Q03358 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Msx2Q03358 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Msx2Q03358 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Msx2Q03358 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
Msx2Q03358 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Msx2Q03358 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Msx2Q03358 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Msx2Q03358 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.03□□□□□ -1.44
Msx2Q03358 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Msx2Q03358 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Msx2Q03358 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Msx2Q03358 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Msx2Q03358 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Msx2Q03358 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC6.03□□□□□ -1.44
Msx2Q03358 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Msx2Q03358 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Msx2Q03358 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Gm3665-201ENSMUST00000177214 2461 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Msx2Q03358 Gm43485-201ENSMUST00000199292 1710 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 AC154511.1-201ENSMUST00000222578 1587 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Gm13100-201ENSMUST00000117157 1439 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Msx2Q03358 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC6.03□□□□□ -1.44
Msx2Q03358 Igkv13-87-201ENSMUST00000114214 286 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Gm15054-201ENSMUST00000117393 281 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Gm14365-201ENSMUST00000117535 587 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Gm12492-201ENSMUST00000117665 564 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Gm8855-201ENSMUST00000118888 878 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Gm24385-201ENSMUST00000122694 350 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Mup-ps12-201ENSMUST00000126217 549 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Gm24444-201ENSMUST00000157244 308 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Gm6808-201ENSMUST00000162341 807 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Msx2Q03358 Gm8256-201ENSMUST00000169178 453 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Msx2Q03358 Gm17919-201ENSMUST00000173344 312 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Msx2Q03358 Gm26335-201ENSMUST00000178449 107 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Gm23269-201ENSMUST00000178701 107 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Msx2Q03358 Gm28846-201ENSMUST00000189161 368 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Gm4785-201ENSMUST00000191025 751 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Gm29389-201ENSMUST00000191562 352 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Msx2Q03358 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Msx2Q03358 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC6.03□□□□□ -1.44
Msx2Q03358 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Gm45156-201ENSMUST00000207255 439 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Gm18672-201ENSMUST00000208035 270 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Gm31663-202ENSMUST00000208481 1190 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Gm45474-201ENSMUST00000209471 408 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 AC153847.1-201ENSMUST00000214524 353 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 AC160970.1-201ENSMUST00000219311 475 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Msx2Q03358 AC141642.1-201ENSMUST00000220598 229 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Msx2Q03358 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
Msx2Q03358 AC091783.2-201ENSMUST00000224626 740 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
Msx2Q03358 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Msx2Q03358 AC115304.1-202ENSMUST00000226850 837 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Msx2Q03358 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Msx2Q03358 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Msx2Q03358 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Msx2Q03358 Gm25189-201ENSMUST00000083911 164 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Msx2Q03358 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Msx2Q03358 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
Msx2Q03358 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Msx2Q03358 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Msx2Q03358 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC6.03□□□□□ -1.44
Msx2Q03358 AC113031.7-201ENSMUST00000228609 1928 ntBASIC6.03□□□□□ -1.44
Msx2Q03358 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms