Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col8a1Q00780 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm38104-201ENSMUST00000195121 1895 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col8a1Q00780 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col8a1Q00780 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col8a1Q00780 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col8a1Q00780 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col8a1Q00780 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm20486-201ENSMUST00000101544 128 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Mir193b-201ENSMUST00000103784 79 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm23133-201ENSMUST00000104255 135 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col8a1Q00780 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm22072-201ENSMUST00000116850 121 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm22091-201ENSMUST00000116908 127 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm13265-201ENSMUST00000118090 421 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm14899-201ENSMUST00000118673 548 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm13013-201ENSMUST00000119087 523 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm11708-201ENSMUST00000119530 832 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm11512-201ENSMUST00000119669 663 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm13537-201ENSMUST00000120467 267 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm15158-201ENSMUST00000120577 570 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm13007-201ENSMUST00000121866 365 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm12650-201ENSMUST00000121966 258 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm26037-201ENSMUST00000158150 311 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm23408-201ENSMUST00000158523 265 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm22945-201ENSMUST00000158557 157 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm17060-201ENSMUST00000172394 824 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Mir3095-201ENSMUST00000175552 87 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col8a1Q00780 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm27006-201ENSMUST00000182218 943 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm27919-201ENSMUST00000185163 107 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm28596-201ENSMUST00000185870 696 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm28700-201ENSMUST00000187614 579 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm32295-201ENSMUST00000192558 696 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm18752-201ENSMUST00000192876 608 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm37784-201ENSMUST00000193233 189 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm31260-201ENSMUST00000193478 696 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm9710-201ENSMUST00000198053 499 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm43224-201ENSMUST00000201567 898 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm43105-201ENSMUST00000202987 459 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC5.41□□□□□ -1.54
Col8a1Q00780 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm17988-201ENSMUST00000208796 535 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC5.41□□□□□ -1.54
Col8a1Q00780 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 AC109212.1-201ENSMUST00000215561 427 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm18225-201ENSMUST00000216708 742 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC5.41□□□□□ -1.54
Col8a1Q00780 AC126554.4-201ENSMUST00000221055 409 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 AC156037.1-201ENSMUST00000221133 127 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 AC125543.3-201ENSMUST00000221991 126 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.41□□□□□ -1.54
Col8a1Q00780 AC140451.2-202ENSMUST00000226156 574 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 AC139294.1-201ENSMUST00000226708 571 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col8a1Q00780 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm15732-201ENSMUST00000079794 480 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm22053-201ENSMUST00000083394 200 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm22444-201ENSMUST00000093693 108 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col8a1Q00780 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col8a1Q00780 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm43842-201ENSMUST00000202890 2982 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms