Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm26170-201ENSMUST00000158419 148 ntBASIC5.08□□□□□ -1.6
Sox3P53784 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Sox3P53784 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Sox3P53784 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Sox3P53784 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Sox3P53784 Gm19029-201ENSMUST00000189923 564 ntBASIC5.08□□□□□ -1.6
Sox3P53784 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC5.08□□□□□ -1.6
Sox3P53784 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Sox3P53784 Gm43655-201ENSMUST00000197367 222 ntBASIC5.08□□□□□ -1.6
Sox3P53784 Gm6649-201ENSMUST00000199743 1165 ntBASIC5.08□□□□□ -1.6
Sox3P53784 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC5.08□□□□□ -1.6
Sox3P53784 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Sox3P53784 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC5.08□□□□□ -1.6
Sox3P53784 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.08□□□□□ -1.6
Sox3P53784 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
Sox3P53784 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.08□□□□□ -1.6
Sox3P53784 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox3P53784 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Sox3P53784 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.08□□□□□ -1.6
Sox3P53784 Gm24706-201ENSMUST00000082806 137 ntBASIC5.08□□□□□ -1.6
Sox3P53784 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Sox3P53784 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Sox3P53784 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox3P53784 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.08□□□□□ -1.6
Sox3P53784 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox3P53784 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.08□□□□□ -1.6
Sox3P53784 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox3P53784 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.08□□□□□ -1.6
Sox3P53784 Gm43490-201ENSMUST00000197593 2652 ntBASIC5.08□□□□□ -1.6
Sox3P53784 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox3P53784 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC5.08□□□□□ -1.6
Sox3P53784 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sox3P53784 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox3P53784 Gm5925-201ENSMUST00000105016 1497 ntBASIC5.07□□□□□ -1.6
Sox3P53784 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sox3P53784 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Sox3P53784 Gm44739-201ENSMUST00000205294 1426 ntBASIC5.07□□□□□ -1.6
Sox3P53784 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sox3P53784 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox3P53784 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox3P53784 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox3P53784 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Sox3P53784 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox3P53784 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox3P53784 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Sox3P53784 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox3P53784 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox3P53784 Gm42819-201ENSMUST00000199630 5121 ntBASIC5.07□□□□□ -1.6
Sox3P53784 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sox3P53784 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Sox3P53784 Gm14172-201ENSMUST00000118255 644 ntBASIC5.07□□□□□ -1.6
Sox3P53784 Gm6062-201ENSMUST00000120462 631 ntBASIC5.07□□□□□ -1.6
Sox3P53784 Gm6175-201ENSMUST00000121351 400 ntBASIC5.07□□□□□ -1.6
Sox3P53784 Gm25179-201ENSMUST00000122632 128 ntBASIC5.07□□□□□ -1.6
Sox3P53784 Gm25293-201ENSMUST00000122792 285 ntBASIC5.07□□□□□ -1.6
Sox3P53784 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.07□□□□□ -1.6
Sox3P53784 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC5.07□□□□□ -1.6
Sox3P53784 Gm19898-201ENSMUST00000177490 251 ntBASIC5.07□□□□□ -1.6
Sox3P53784 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox3P53784 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.07□□□□□ -1.6
Sox3P53784 Gm37966-201ENSMUST00000193122 326 ntBASIC5.07□□□□□ -1.6
Sox3P53784 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC5.07□□□□□ -1.6
Sox3P53784 Gm38360-201ENSMUST00000195130 454 ntBASIC5.07□□□□□ -1.6
Sox3P53784 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.07□□□□□ -1.6
Sox3P53784 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.07□□□□□ -1.6
Sox3P53784 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.07□□□□□ -1.6
Sox3P53784 Gm44539-201ENSMUST00000206010 238 ntBASIC5.07□□□□□ -1.6
Sox3P53784 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Sox3P53784 AC153840.1-201ENSMUST00000219685 313 ntBASIC5.07□□□□□ -1.6
Sox3P53784 AC132260.2-201ENSMUST00000224482 344 ntBASIC5.07□□□□□ -1.6
Sox3P53784 AC139758.1-201ENSMUST00000226573 930 ntBASIC5.07□□□□□ -1.6
Sox3P53784 AC152394.2-202ENSMUST00000228503 1064 ntBASIC5.07□□□□□ -1.6
Sox3P53784 Gm7887-201ENSMUST00000056948 537 ntBASIC5.07□□□□□ -1.6
Sox3P53784 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.07□□□□□ -1.6
Sox3P53784 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Sox3P53784 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox3P53784 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.07□□□□□ -1.6
Sox3P53784 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.07□□□□□ -1.6
Sox3P53784 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox3P53784 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Sox3P53784 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sox3P53784 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.07□□□□□ -1.6
Sox3P53784 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sox3P53784 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.06□□□□□ -1.6
Sox3P53784 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.06□□□□□ -1.6
Sox3P53784 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Sox3P53784 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Sox3P53784 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sox3P53784 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Sox3P53784 Gm43588-201ENSMUST00000201862 2298 ntBASIC5.06□□□□□ -1.6
Sox3P53784 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Sox3P53784 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Sox3P53784 Gm23274-201ENSMUST00000104056 130 ntBASIC5.06□□□□□ -1.6
Sox3P53784 Mir1193-201ENSMUST00000116761 121 ntBASIC5.06□□□□□ -1.6
Sox3P53784 Gm6620-201ENSMUST00000120113 715 ntBASIC5.06□□□□□ -1.6
Sox3P53784 n-R5s30-201ENSMUST00000122624 122 ntBASIC5.06□□□□□ -1.6
Sox3P53784 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Sox3P53784 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.06□□□□□ -1.6
Sox3P53784 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Sox3P53784 Gm22870-201ENSMUST00000157501 112 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms