Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Tnfsf4P43488 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Tnfsf4P43488 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Tnfsf4P43488 Gm11631-201ENSMUST00000119220 156 ntBASIC4.83□□□□□ -1.64
Tnfsf4P43488 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Tnfsf4P43488 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Tnfsf4P43488 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC4.83□□□□□ -1.64
Tnfsf4P43488 Gm26086-201ENSMUST00000157902 263 ntBASIC4.83□□□□□ -1.64
Tnfsf4P43488 Gm25865-201ENSMUST00000158247 104 ntBASIC4.83□□□□□ -1.64
Tnfsf4P43488 Gm16557-201ENSMUST00000159182 191 ntBASIC4.83□□□□□ -1.64
Tnfsf4P43488 Mir3572-201ENSMUST00000175549 86 ntBASIC4.83□□□□□ -1.64
Tnfsf4P43488 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC4.83□□□□□ -1.64
Tnfsf4P43488 Gm26925-201ENSMUST00000182470 957 ntBASIC4.83□□□□□ -1.64
Tnfsf4P43488 Mir7222-201ENSMUST00000183740 75 ntBASIC4.83□□□□□ -1.64
Tnfsf4P43488 Mir6244-201ENSMUST00000184156 117 ntBASIC4.83□□□□□ -1.64
Tnfsf4P43488 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Tnfsf4P43488 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC4.83□□□□□ -1.64
Tnfsf4P43488 Gm37614-201ENSMUST00000195645 210 ntBASIC4.83□□□□□ -1.64
Tnfsf4P43488 Gm42459-201ENSMUST00000199679 742 ntBASIC4.83□□□□□ -1.64
Tnfsf4P43488 Gm43036-201ENSMUST00000200594 373 ntBASIC4.83□□□□□ -1.64
Tnfsf4P43488 Gm44261-201ENSMUST00000203337 209 ntBASIC4.83□□□□□ -1.64
Tnfsf4P43488 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC4.83□□□□□ -1.64
Tnfsf4P43488 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC4.83□□□□□ -1.64
Tnfsf4P43488 AC241593.2-201ENSMUST00000225099 510 ntBASIC4.83□□□□□ -1.64
Tnfsf4P43488 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Tnfsf4P43488 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Tnfsf4P43488 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Tnfsf4P43488 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Tnfsf4P43488 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Tnfsf4P43488 Gm15189-201ENSMUST00000121164 1966 ntBASIC4.83□□□□□ -1.64
Tnfsf4P43488 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Tnfsf4P43488 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Tnfsf4P43488 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Tnfsf4P43488 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Tnfsf4P43488 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
Tnfsf4P43488 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC4.83□□□□□ -1.64
Tnfsf4P43488 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Tnfsf4P43488 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Tnfsf4P43488 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Tnfsf4P43488 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.82□□□□□ -1.64
Tnfsf4P43488 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC4.82□□□□□ -1.64
Tnfsf4P43488 Gm44535-201ENSMUST00000208889 3136 ntBASIC4.82□□□□□ -1.64
Tnfsf4P43488 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
Tnfsf4P43488 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Tnfsf4P43488 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Tnfsf4P43488 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Tnfsf4P43488 Gm24170-201ENSMUST00000104124 133 ntBASIC4.82□□□□□ -1.64
Tnfsf4P43488 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Tnfsf4P43488 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC4.82□□□□□ -1.64
Tnfsf4P43488 Gm14619-201ENSMUST00000120480 168 ntBASIC4.82□□□□□ -1.64
Tnfsf4P43488 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC4.82□□□□□ -1.64
Tnfsf4P43488 Gm24402-201ENSMUST00000157873 91 ntBASIC4.82□□□□□ -1.64
Tnfsf4P43488 Gm23030-201ENSMUST00000158004 273 ntBASIC4.82□□□□□ -1.64
Tnfsf4P43488 Gm25714-201ENSMUST00000158626 296 ntBASIC4.82□□□□□ -1.64
Tnfsf4P43488 Gm24343-201ENSMUST00000158708 111 ntBASIC4.82□□□□□ -1.64
Tnfsf4P43488 Gm25363-201ENSMUST00000158850 245 ntBASIC4.82□□□□□ -1.64
Tnfsf4P43488 Gm7609-204ENSMUST00000161424 461 ntBASIC4.82□□□□□ -1.64
Tnfsf4P43488 Gm24369-201ENSMUST00000175387 96 ntBASIC4.82□□□□□ -1.64
Tnfsf4P43488 Gm28468-201ENSMUST00000188536 615 ntBASIC4.82□□□□□ -1.64
Tnfsf4P43488 Gm9442-201ENSMUST00000194242 319 ntBASIC4.82□□□□□ -1.64
Tnfsf4P43488 Gm33952-201ENSMUST00000197795 408 ntBASIC4.82□□□□□ -1.64
Tnfsf4P43488 Gm2623-201ENSMUST00000199229 286 ntBASIC4.82□□□□□ -1.64
Tnfsf4P43488 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC4.82□□□□□ -1.64
Tnfsf4P43488 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC4.82□□□□□ -1.64
Tnfsf4P43488 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Tnfsf4P43488 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC4.82□□□□□ -1.64
Tnfsf4P43488 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC4.82□□□□□ -1.64
Tnfsf4P43488 Gm21041-201ENSMUST00000214829 823 ntBASIC4.82□□□□□ -1.64
Tnfsf4P43488 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Tnfsf4P43488 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC4.82□□□□□ -1.64
Tnfsf4P43488 CT025579.3-201ENSMUST00000224543 451 ntBASIC4.82□□□□□ -1.64
Tnfsf4P43488 CT009600.2-201ENSMUST00000226638 481 ntBASIC4.82□□□□□ -1.64
Tnfsf4P43488 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
Tnfsf4P43488 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC4.82□□□□□ -1.64
Tnfsf4P43488 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Tnfsf4P43488 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC4.82□□□□□ -1.64
Tnfsf4P43488 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Tnfsf4P43488 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Tnfsf4P43488 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC4.82□□□□□ -1.64
Tnfsf4P43488 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Tnfsf4P43488 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Tnfsf4P43488 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Tnfsf4P43488 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC4.82□□□□□ -1.64
Tnfsf4P43488 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
Tnfsf4P43488 Gm38029-201ENSMUST00000192669 2090 ntBASIC4.82□□□□□ -1.64
Tnfsf4P43488 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC4.82□□□□□ -1.64
Tnfsf4P43488 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Tnfsf4P43488 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Tnfsf4P43488 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Tnfsf4P43488 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Tnfsf4P43488 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Tnfsf4P43488 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC4.81□□□□□ -1.64
Tnfsf4P43488 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Tnfsf4P43488 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Tnfsf4P43488 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Tnfsf4P43488 Gm14575-201ENSMUST00000117210 560 ntBASIC4.81□□□□□ -1.64
Tnfsf4P43488 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC4.81□□□□□ -1.64
Tnfsf4P43488 Gm14220-201ENSMUST00000118114 449 ntBASIC4.81□□□□□ -1.64
Tnfsf4P43488 Gm13452-201ENSMUST00000120896 1097 ntBASIC4.81□□□□□ -1.64
Tnfsf4P43488 Gm15057-201ENSMUST00000121516 534 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms