Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.99□□□□□ -1.61
Cdx2P43241 Gm24186-201ENSMUST00000157983 127 ntBASIC4.99□□□□□ -1.61
Cdx2P43241 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cdx2P43241 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cdx2P43241 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cdx2P43241 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cdx2P43241 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cdx2P43241 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cdx2P43241 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cdx2P43241 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cdx2P43241 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cdx2P43241 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cdx2P43241 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cdx2P43241 Gm27820-201ENSMUST00000183628 175 ntBASIC4.99□□□□□ -1.61
Cdx2P43241 Gm27492-201ENSMUST00000185194 187 ntBASIC4.99□□□□□ -1.61
Cdx2P43241 Gm28503-201ENSMUST00000185966 147 ntBASIC4.99□□□□□ -1.61
Cdx2P43241 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cdx2P43241 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC4.99□□□□□ -1.61
Cdx2P43241 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC4.99□□□□□ -1.61
Cdx2P43241 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC4.99□□□□□ -1.61
Cdx2P43241 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Cdx2P43241 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC4.99□□□□□ -1.61
Cdx2P43241 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC4.99□□□□□ -1.61
Cdx2P43241 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.99□□□□□ -1.61
Cdx2P43241 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cdx2P43241 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cdx2P43241 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cdx2P43241 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cdx2P43241 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cdx2P43241 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Cdx2P43241 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC4.99□□□□□ -1.61
Cdx2P43241 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC4.99□□□□□ -1.61
Cdx2P43241 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cdx2P43241 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Cdx2P43241 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cdx2P43241 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Cdx2P43241 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cdx2P43241 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Cdx2P43241 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Cdx2P43241 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Cdx2P43241 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Cdx2P43241 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Cdx2P43241 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC4.98□□□□□ -1.61
Cdx2P43241 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Cdx2P43241 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Cdx2P43241 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Cdx2P43241 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Cdx2P43241 Gm15170-201ENSMUST00000121593 2023 ntBASIC4.98□□□□□ -1.61
Cdx2P43241 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
Cdx2P43241 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC4.98□□□□□ -1.61
Cdx2P43241 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Cdx2P43241 Gm22657-201ENSMUST00000104197 132 ntBASIC4.98□□□□□ -1.61
Cdx2P43241 Gm11617-201ENSMUST00000119609 639 ntBASIC4.98□□□□□ -1.61
Cdx2P43241 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Cdx2P43241 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Cdx2P43241 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC4.98□□□□□ -1.61
Cdx2P43241 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Cdx2P43241 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Cdx2P43241 Gm25278-201ENSMUST00000157267 120 ntBASIC4.98□□□□□ -1.61
Cdx2P43241 Gm10048-201ENSMUST00000194196 372 ntBASIC4.98□□□□□ -1.61
Cdx2P43241 Trav3-2-201ENSMUST00000198999 305 ntBASIC4.98□□□□□ -1.61
Cdx2P43241 Gm44412-201ENSMUST00000203018 294 ntBASIC4.98□□□□□ -1.61
Cdx2P43241 Gm44214-201ENSMUST00000204153 606 ntBASIC4.98□□□□□ -1.61
Cdx2P43241 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC4.98□□□□□ -1.61
Cdx2P43241 Gm46191-201ENSMUST00000218899 433 ntBASIC4.98□□□□□ -1.61
Cdx2P43241 Gm18940-201ENSMUST00000222518 871 ntBASIC4.98□□□□□ -1.61
Cdx2P43241 AC112142.1-206ENSMUST00000228136 982 ntBASIC4.98□□□□□ -1.61
Cdx2P43241 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Cdx2P43241 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Cdx2P43241 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Cdx2P43241 AC105407.2-201ENSMUST00000223707 3911 ntBASIC4.98□□□□□ -1.61
Cdx2P43241 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC4.98□□□□□ -1.61
Cdx2P43241 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Cdx2P43241 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Cdx2P43241 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Cdx2P43241 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC4.98□□□□□ -1.61
Cdx2P43241 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Cdx2P43241 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Cdx2P43241 Gm44248-201ENSMUST00000203079 1549 ntBASIC4.97□□□□□ -1.61
Cdx2P43241 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
Cdx2P43241 Gm44751-201ENSMUST00000208302 4387 ntBASIC4.97□□□□□ -1.61
Cdx2P43241 Gm37551-201ENSMUST00000195556 2861 ntBASIC4.97□□□□□ -1.61
Cdx2P43241 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Cdx2P43241 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Cdx2P43241 Gm37060-201ENSMUST00000194997 2397 ntBASIC4.97□□□□□ -1.61
Cdx2P43241 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC4.97□□□□□ -1.61
Cdx2P43241 Gm45222-201ENSMUST00000207029 4307 ntBASIC4.97□□□□□ -1.61
Cdx2P43241 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Cdx2P43241 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC4.97□□□□□ -1.61
Cdx2P43241 Gm12073-201ENSMUST00000117382 524 ntBASIC4.97□□□□□ -1.61
Cdx2P43241 Gm15905-201ENSMUST00000137042 298 ntBASIC4.97□□□□□ -1.61
Cdx2P43241 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Cdx2P43241 Gm24217-201ENSMUST00000158260 133 ntBASIC4.97□□□□□ -1.61
Cdx2P43241 Mir6410-201ENSMUST00000184204 104 ntBASIC4.97□□□□□ -1.61
Cdx2P43241 Gm43418-201ENSMUST00000201334 428 ntBASIC4.97□□□□□ -1.61
Cdx2P43241 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC4.97□□□□□ -1.61
Cdx2P43241 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC4.97□□□□□ -1.61
Cdx2P43241 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.97□□□□□ -1.61
Cdx2P43241 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Cdx2P43241 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms