Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Zfp389-201ENSMUST00000118425 675 ntBASIC6.25□□□□□ -1.41
Traf1P39428 Gm11369-201ENSMUST00000120812 318 ntBASIC6.25□□□□□ -1.41
Traf1P39428 Gm7670-201ENSMUST00000121272 641 ntBASIC6.25□□□□□ -1.41
Traf1P39428 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Traf1P39428 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Traf1P39428 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Traf1P39428 Gm26318-201ENSMUST00000176507 96 ntBASIC6.25□□□□□ -1.41
Traf1P39428 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Traf1P39428 Gm27148-201ENSMUST00000185086 160 ntBASIC6.25□□□□□ -1.41
Traf1P39428 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC6.25□□□□□ -1.41
Traf1P39428 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Traf1P39428 Mir409-201ENSMUST00000198153 79 ntBASIC6.25□□□□□ -1.41
Traf1P39428 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Traf1P39428 Gm19039-201ENSMUST00000204363 575 ntBASIC6.25□□□□□ -1.41
Traf1P39428 Gm18215-201ENSMUST00000204429 798 ntBASIC6.25□□□□□ -1.41
Traf1P39428 Gm44277-201ENSMUST00000205128 649 ntBASIC6.25□□□□□ -1.41
Traf1P39428 Gm6828-201ENSMUST00000207902 1186 ntBASIC6.25□□□□□ -1.41
Traf1P39428 Gm45660-201ENSMUST00000210267 151 ntBASIC6.25□□□□□ -1.41
Traf1P39428 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC6.25□□□□□ -1.41
Traf1P39428 Gm7688-201ENSMUST00000212857 337 ntBASIC6.25□□□□□ -1.41
Traf1P39428 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Traf1P39428 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Traf1P39428 AC121804.1-201ENSMUST00000221016 394 ntBASIC6.25□□□□□ -1.41
Traf1P39428 AC158511.1-201ENSMUST00000223622 764 ntBASIC6.25□□□□□ -1.41
Traf1P39428 Zfp429-203ENSMUST00000224684 524 ntBASIC6.25□□□□□ -1.41
Traf1P39428 AC154452.1-201ENSMUST00000225819 241 ntBASIC6.25□□□□□ -1.41
Traf1P39428 AC164315.1-201ENSMUST00000226452 708 ntBASIC6.25□□□□□ -1.41
Traf1P39428 AC164597.1-201ENSMUST00000226538 514 ntBASIC6.25□□□□□ -1.41
Traf1P39428 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
Traf1P39428 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Traf1P39428 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Traf1P39428 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Traf1P39428 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Traf1P39428 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC6.25□□□□□ -1.41
Traf1P39428 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Traf1P39428 Gm42686-201ENSMUST00000199172 4108 ntBASIC6.25□□□□□ -1.41
Traf1P39428 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Traf1P39428 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Traf1P39428 Gm43466-201ENSMUST00000197836 5214 ntBASIC6.25□□□□□ -1.41
Traf1P39428 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC6.25□□□□□ -1.41
Traf1P39428 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Traf1P39428 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Traf1P39428 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Traf1P39428 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Traf1P39428 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC6.25□□□□□ -1.41
Traf1P39428 Gm42905-201ENSMUST00000196237 1611 ntBASIC6.25□□□□□ -1.41
Traf1P39428 Gm37964-201ENSMUST00000192459 4905 ntBASIC6.24□□□□□ -1.41
Traf1P39428 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC6.24□□□□□ -1.41
Traf1P39428 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC6.24□□□□□ -1.41
Traf1P39428 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Traf1P39428 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC6.24□□□□□ -1.41
Traf1P39428 Gm12808-201ENSMUST00000120597 404 ntBASIC6.24□□□□□ -1.41
Traf1P39428 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC6.24□□□□□ -1.41
Traf1P39428 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC6.24□□□□□ -1.41
Traf1P39428 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Traf1P39428 Gm23537-201ENSMUST00000157536 330 ntBASIC6.24□□□□□ -1.41
Traf1P39428 Gm22916-201ENSMUST00000157616 119 ntBASIC6.24□□□□□ -1.41
Traf1P39428 Gm7609-204ENSMUST00000161424 461 ntBASIC6.24□□□□□ -1.41
Traf1P39428 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Traf1P39428 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Traf1P39428 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Traf1P39428 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC6.24□□□□□ -1.41
Traf1P39428 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC6.24□□□□□ -1.41
Traf1P39428 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC6.24□□□□□ -1.41
Traf1P39428 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Traf1P39428 Gm17981-201ENSMUST00000191109 739 ntBASIC6.24□□□□□ -1.41
Traf1P39428 Gm7496-201ENSMUST00000192573 1034 ntBASIC6.24□□□□□ -1.41
Traf1P39428 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC6.24□□□□□ -1.41
Traf1P39428 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Traf1P39428 Gm6049-201ENSMUST00000222369 458 ntBASIC6.24□□□□□ -1.41
Traf1P39428 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC6.24□□□□□ -1.41
Traf1P39428 Snora30-201ENSMUST00000083325 130 ntBASIC6.24□□□□□ -1.41
Traf1P39428 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Traf1P39428 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Traf1P39428 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Traf1P39428 Gm42841-201ENSMUST00000199806 1932 ntBASIC6.24□□□□□ -1.41
Traf1P39428 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Traf1P39428 Gm38387-201ENSMUST00000191945 2577 ntBASIC6.24□□□□□ -1.41
Traf1P39428 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Traf1P39428 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Traf1P39428 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Traf1P39428 Gm14857-201ENSMUST00000117862 3185 ntBASIC6.24□□□□□ -1.41
Traf1P39428 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Traf1P39428 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Traf1P39428 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Traf1P39428 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Traf1P39428 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
Traf1P39428 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Traf1P39428 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Traf1P39428 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC6.23□□□□□ -1.41
Traf1P39428 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Traf1P39428 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Traf1P39428 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC6.23□□□□□ -1.41
Traf1P39428 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Traf1P39428 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Traf1P39428 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Traf1P39428 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Traf1P39428 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC6.23□□□□□ -1.41
Traf1P39428 Gm22226-201ENSMUST00000157355 109 ntBASIC6.23□□□□□ -1.41
Traf1P39428 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms