Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Sdc1P18828 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC4.19□□□□□ -1.74
Sdc1P18828 Gm7745-201ENSMUST00000182235 973 ntBASIC4.19□□□□□ -1.74
Sdc1P18828 Mir7005-201ENSMUST00000185089 69 ntBASIC4.19□□□□□ -1.74
Sdc1P18828 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC4.19□□□□□ -1.74
Sdc1P18828 Gm37024-201ENSMUST00000192224 868 ntBASIC4.19□□□□□ -1.74
Sdc1P18828 Gm37445-201ENSMUST00000195318 242 ntBASIC4.19□□□□□ -1.74
Sdc1P18828 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Sdc1P18828 Gm43794-201ENSMUST00000200971 692 ntBASIC4.19□□□□□ -1.74
Sdc1P18828 Gm7492-201ENSMUST00000201745 725 ntBASIC4.19□□□□□ -1.74
Sdc1P18828 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC4.19□□□□□ -1.74
Sdc1P18828 Gm4374-201ENSMUST00000204929 424 ntBASIC4.19□□□□□ -1.74
Sdc1P18828 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC4.19□□□□□ -1.74
Sdc1P18828 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Sdc1P18828 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
Sdc1P18828 CT025665.1-201ENSMUST00000215251 1199 ntBASIC4.19□□□□□ -1.74
Sdc1P18828 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC4.19□□□□□ -1.74
Sdc1P18828 Gm6171-201ENSMUST00000220760 645 ntBASIC4.19□□□□□ -1.74
Sdc1P18828 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Sdc1P18828 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Sdc1P18828 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Sdc1P18828 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Sdc1P18828 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Sdc1P18828 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Sdc1P18828 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.19□□□□□ -1.74
Sdc1P18828 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Sdc1P18828 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
Sdc1P18828 Gm45201-201ENSMUST00000207187 2679 ntBASIC4.19□□□□□ -1.74
Sdc1P18828 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Sdc1P18828 AC131720.1-201ENSMUST00000218629 2132 ntBASIC4.19□□□□□ -1.74
Sdc1P18828 Gm43266-201ENSMUST00000201049 1771 ntBASIC4.19□□□□□ -1.74
Sdc1P18828 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Sdc1P18828 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Sdc1P18828 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.19□□□□□ -1.74
Sdc1P18828 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Sdc1P18828 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Sdc1P18828 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Sdc1P18828 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Sdc1P18828 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Sdc1P18828 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Sdc1P18828 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Sdc1P18828 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Sdc1P18828 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.18□□□□□ -1.74
Sdc1P18828 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Sdc1P18828 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Sdc1P18828 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Sdc1P18828 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
Sdc1P18828 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Sdc1P18828 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Sdc1P18828 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Sdc1P18828 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
Sdc1P18828 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Sdc1P18828 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Sdc1P18828 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC4.18□□□□□ -1.74
Sdc1P18828 Gm11631-201ENSMUST00000119220 156 ntBASIC4.18□□□□□ -1.74
Sdc1P18828 Gm11510-201ENSMUST00000120278 347 ntBASIC4.18□□□□□ -1.74
Sdc1P18828 Gm14229-201ENSMUST00000121178 850 ntBASIC4.18□□□□□ -1.74
Sdc1P18828 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Sdc1P18828 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC4.18□□□□□ -1.74
Sdc1P18828 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Sdc1P18828 Gm22411-201ENSMUST00000175462 126 ntBASIC4.18□□□□□ -1.74
Sdc1P18828 Gm22002-201ENSMUST00000175622 125 ntBASIC4.18□□□□□ -1.74
Sdc1P18828 Gm20778-201ENSMUST00000178524 627 ntBASIC4.18□□□□□ -1.74
Sdc1P18828 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC4.18□□□□□ -1.74
Sdc1P18828 Gm19791-201ENSMUST00000180398 859 ntBASIC4.18□□□□□ -1.74
Sdc1P18828 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Sdc1P18828 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Sdc1P18828 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Sdc1P18828 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC4.18□□□□□ -1.74
Sdc1P18828 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Sdc1P18828 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Sdc1P18828 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Sdc1P18828 Gm29552-201ENSMUST00000190548 660 ntBASIC4.18□□□□□ -1.74
Sdc1P18828 Gm37191-201ENSMUST00000193346 388 ntBASIC4.18□□□□□ -1.74
Sdc1P18828 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Sdc1P18828 Gm43973-201ENSMUST00000203562 210 ntBASIC4.18□□□□□ -1.74
Sdc1P18828 Gm44038-201ENSMUST00000203952 889 ntBASIC4.18□□□□□ -1.74
Sdc1P18828 Gm19039-201ENSMUST00000204363 575 ntBASIC4.18□□□□□ -1.74
Sdc1P18828 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC4.18□□□□□ -1.74
Sdc1P18828 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC4.18□□□□□ -1.74
Sdc1P18828 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC4.18□□□□□ -1.74
Sdc1P18828 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.18□□□□□ -1.74
Sdc1P18828 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.18□□□□□ -1.74
Sdc1P18828 AC162376.1-201ENSMUST00000220120 435 ntBASIC4.18□□□□□ -1.74
Sdc1P18828 AC154636.1-201ENSMUST00000223226 126 ntBASIC4.18□□□□□ -1.74
Sdc1P18828 AC159263.3-201ENSMUST00000223434 460 ntBASIC4.18□□□□□ -1.74
Sdc1P18828 CT010486.1-201ENSMUST00000224609 422 ntBASIC4.18□□□□□ -1.74
Sdc1P18828 AC102676.1-201ENSMUST00000228131 719 ntBASIC4.18□□□□□ -1.74
Sdc1P18828 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Sdc1P18828 Gm6195-201ENSMUST00000063059 357 ntBASIC4.18□□□□□ -1.74
Sdc1P18828 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Sdc1P18828 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Sdc1P18828 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Sdc1P18828 Gm23054-201ENSMUST00000082804 162 ntBASIC4.18□□□□□ -1.74
Sdc1P18828 Mir20a-201ENSMUST00000083508 107 ntBASIC4.18□□□□□ -1.74
Sdc1P18828 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Sdc1P18828 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Sdc1P18828 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Sdc1P18828 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC4.18□□□□□ -1.74
Sdc1P18828 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms