Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC4.39□□□□□ -1.71
Cdx1P18111 AC154767.2-201ENSMUST00000224584 414 ntBASIC4.39□□□□□ -1.71
Cdx1P18111 Zfp429-203ENSMUST00000224684 524 ntBASIC4.39□□□□□ -1.71
Cdx1P18111 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cdx1P18111 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cdx1P18111 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Cdx1P18111 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Cdx1P18111 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cdx1P18111 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC4.39□□□□□ -1.71
Cdx1P18111 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.39□□□□□ -1.71
Cdx1P18111 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Cdx1P18111 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
Cdx1P18111 AC156025.2-201ENSMUST00000225907 1533 ntBASIC4.39□□□□□ -1.71
Cdx1P18111 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cdx1P18111 Gm19131-202ENSMUST00000203464 3208 ntBASIC4.39□□□□□ -1.71
Cdx1P18111 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.39□□□□□ -1.71
Cdx1P18111 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Cdx1P18111 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cdx1P18111 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cdx1P18111 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Cdx1P18111 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.39□□□□□ -1.71
Cdx1P18111 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cdx1P18111 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC4.39□□□□□ -1.71
Cdx1P18111 Gm37051-201ENSMUST00000194535 2943 ntBASIC4.39□□□□□ -1.71
Cdx1P18111 Gm37589-201ENSMUST00000193609 3994 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 Gm37639-201ENSMUST00000191623 2785 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Cdx1P18111 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Cdx1P18111 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Cdx1P18111 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Cdx1P18111 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Cdx1P18111 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Cdx1P18111 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Cdx1P18111 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Cdx1P18111 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC4.38□□□□□ -1.71
Cdx1P18111 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Cdx1P18111 Gm11105-201ENSMUST00000112781 478 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 Gm12901-201ENSMUST00000118690 532 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 Gm14335-201ENSMUST00000119165 810 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 Gm5405-201ENSMUST00000120478 609 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 Gm13808-201ENSMUST00000121353 184 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 Gm12444-201ENSMUST00000121512 877 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 Gm12396-201ENSMUST00000121600 306 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 Gm14970-201ENSMUST00000122289 355 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC4.38□□□□□ -1.71
Cdx1P18111 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.38□□□□□ -1.71
Cdx1P18111 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC4.38□□□□□ -1.71
Cdx1P18111 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC4.38□□□□□ -1.71
Cdx1P18111 Gm25389-201ENSMUST00000157340 286 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 Gm25363-201ENSMUST00000158850 245 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 Gm24741-201ENSMUST00000158857 106 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 Gm21772-201ENSMUST00000169213 478 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 Gm17126-201ENSMUST00000172276 523 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 Gm24957-201ENSMUST00000179604 132 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
Cdx1P18111 Gm27044-201ENSMUST00000183033 796 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC4.38□□□□□ -1.71
Cdx1P18111 Gm28639-201ENSMUST00000191519 481 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 Gm43516-201ENSMUST00000196891 322 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC4.38□□□□□ -1.71
Cdx1P18111 Gm44316-201ENSMUST00000199274 97 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 Gm19761-201ENSMUST00000205372 391 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Cdx1P18111 Gm4574-201ENSMUST00000207804 542 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 Gm17988-201ENSMUST00000208796 535 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 LOC665443-201ENSMUST00000212284 796 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC4.38□□□□□ -1.71
Cdx1P18111 AC159208.1-201ENSMUST00000221403 649 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 AC163743.1-201ENSMUST00000224309 270 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 CT030662.3-201ENSMUST00000228751 476 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 AC154846.2-201ENSMUST00000228805 424 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Cdx1P18111 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Cdx1P18111 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
Cdx1P18111 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Cdx1P18111 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Cdx1P18111 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Cdx1P18111 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Cdx1P18111 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC4.38□□□□□ -1.71
Cdx1P18111 Gm7205-201ENSMUST00000196032 1323 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 Gm38351-201ENSMUST00000195466 2518 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 Gm37846-201ENSMUST00000191840 3774 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Cdx1P18111 Gm5512-201ENSMUST00000218013 1353 ntBASIC4.38□□□□□ -1.71
Cdx1P18111 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.38□□□□□ -1.71
Cdx1P18111 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC4.38□□□□□ -1.71
Cdx1P18111 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Cdx1P18111 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.37□□□□□ -1.71
Cdx1P18111 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
Cdx1P18111 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Cdx1P18111 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm3962-201ENSMUST00000173027 2587 ntBASIC4.37□□□□□ -1.71
Cdx1P18111 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm43258-201ENSMUST00000200312 1950 ntBASIC4.37□□□□□ -1.71
Cdx1P18111 Gm12308-201ENSMUST00000120440 389 ntBASIC4.37□□□□□ -1.71
Cdx1P18111 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC4.37□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms