Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm7890-201ENSMUST00000204877 601 ntBASIC5.39□□□□□ -1.55
Lire1P11260 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC5.39□□□□□ -1.55
Lire1P11260 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.39□□□□□ -1.55
Lire1P11260 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC5.39□□□□□ -1.55
Lire1P11260 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC5.39□□□□□ -1.55
Lire1P11260 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC5.39□□□□□ -1.55
Lire1P11260 Gm18871-201ENSMUST00000218655 745 ntBASIC5.39□□□□□ -1.55
Lire1P11260 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC5.39□□□□□ -1.55
Lire1P11260 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC5.39□□□□□ -1.55
Lire1P11260 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Lire1P11260 Gm272-201ENSMUST00000222073 919 ntBASIC5.39□□□□□ -1.55
Lire1P11260 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.39□□□□□ -1.55
Lire1P11260 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Lire1P11260 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC5.39□□□□□ -1.55
Lire1P11260 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Lire1P11260 Gm23302-201ENSMUST00000082710 100 ntBASIC5.39□□□□□ -1.55
Lire1P11260 Mir375-201ENSMUST00000083682 64 ntBASIC5.39□□□□□ -1.55
Lire1P11260 Gm22155-201ENSMUST00000083836 162 ntBASIC5.39□□□□□ -1.55
Lire1P11260 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Lire1P11260 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Lire1P11260 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC5.39□□□□□ -1.55
Lire1P11260 Gm7269-201ENSMUST00000210819 1373 ntBASIC5.39□□□□□ -1.55
Lire1P11260 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Lire1P11260 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC5.39□□□□□ -1.55
Lire1P11260 Gm2033-201ENSMUST00000210753 2287 ntBASIC5.39□□□□□ -1.55
Lire1P11260 Gm19093-201ENSMUST00000210671 1454 ntBASIC5.39□□□□□ -1.55
Lire1P11260 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Lire1P11260 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Lire1P11260 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Lire1P11260 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Lire1P11260 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Gm43843-201ENSMUST00000202396 1587 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Lire1P11260 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Lire1P11260 AC159476.1-201ENSMUST00000215914 1668 ntBASIC5.38□□□□□ -1.55
Lire1P11260 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Lire1P11260 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Lire1P11260 Gm14335-201ENSMUST00000119165 810 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Gm15981-201ENSMUST00000119196 457 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Gm16074-201ENSMUST00000119524 444 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Gm14331-201ENSMUST00000120396 409 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Gm13998-201ENSMUST00000120952 335 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Gm6969-201ENSMUST00000140065 342 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Lire1P11260 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Lire1P11260 Gm23250-201ENSMUST00000157444 267 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Gm23669-201ENSMUST00000157470 128 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Gm23553-201ENSMUST00000157817 295 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Gm24731-201ENSMUST00000158227 131 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Gm23050-201ENSMUST00000158775 165 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Gm25363-201ENSMUST00000158850 245 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Gm16566-201ENSMUST00000160387 910 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Gm8582-201ENSMUST00000164061 789 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Gm17153-201ENSMUST00000171314 490 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Lire1P11260 Gm26057-201ENSMUST00000178099 165 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Mir6992-201ENSMUST00000183342 109 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Lire1P11260 Gm9569-201ENSMUST00000187492 787 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Gm17934-201ENSMUST00000192818 422 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Gm37784-201ENSMUST00000193233 189 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Gm42652-201ENSMUST00000199073 614 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Lire1P11260 Gm34149-201ENSMUST00000203547 304 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Gm45026-201ENSMUST00000205292 833 ntBASIC5.38□□□□□ -1.55
Lire1P11260 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Lire1P11260 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.38□□□□□ -1.55
Lire1P11260 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC5.38□□□□□ -1.55
Lire1P11260 Gm6056-201ENSMUST00000221253 488 ntBASIC5.38□□□□□ -1.55
Lire1P11260 AC129537.1-201ENSMUST00000226596 1228 ntBASIC5.38□□□□□ -1.55
Lire1P11260 AC099612.2-201ENSMUST00000226824 721 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Rybp-ps-201ENSMUST00000069489 681 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Lire1P11260 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Lire1P11260 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Lire1P11260 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Gm5512-201ENSMUST00000218013 1353 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Lire1P11260 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Lire1P11260 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.38□□□□□ -1.55
Lire1P11260 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Lire1P11260 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Lire1P11260 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Lire1P11260 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Lire1P11260 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Lire1P11260 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Lire1P11260 Gm11516-201ENSMUST00000118450 1582 ntBASIC5.38□□□□□ -1.55
Lire1P11260 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Lire1P11260 AC153959.1-201ENSMUST00000213617 1694 ntBASIC5.37□□□□□ -1.55
Lire1P11260 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Lire1P11260 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Lire1P11260 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Lire1P11260 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Lire1P11260 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.37□□□□□ -1.55
Lire1P11260 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Lire1P11260 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Lire1P11260 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms