Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Igkv11-106-201ENSMUST00000103331 346 ntBASIC6.01□□□□□ -1.45
Col1a1P11087 Gm6673-201ENSMUST00000166114 700 ntBASIC6.01□□□□□ -1.45
Col1a1P11087 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC6.01□□□□□ -1.45
Col1a1P11087 Vmn1r82-202ENSMUST00000191002 918 ntBASIC6.01□□□□□ -1.45
Col1a1P11087 Gm17951-201ENSMUST00000198536 496 ntBASIC6.01□□□□□ -1.45
Col1a1P11087 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC6.01□□□□□ -1.45
Col1a1P11087 Gm4263-201ENSMUST00000220693 1101 ntBASIC6.01□□□□□ -1.45
Col1a1P11087 AC121978.1-201ENSMUST00000228357 380 ntBASIC6.01□□□□□ -1.45
Col1a1P11087 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Col1a1P11087 Olfr881-201ENSMUST00000074611 948 ntBASIC6.01□□□□□ -1.45
Col1a1P11087 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col1a1P11087 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col1a1P11087 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col1a1P11087 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Col1a1P11087 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
Col1a1P11087 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC6.01□□□□□ -1.45
Col1a1P11087 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col1a1P11087 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col1a1P11087 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col1a1P11087 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC6□□□□□ -1.45
Col1a1P11087 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC6□□□□□ -1.45
Col1a1P11087 AC160029.1-201ENSMUST00000219628 2678 ntBASIC6□□□□□ -1.45
Col1a1P11087 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col1a1P11087 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Col1a1P11087 AC123705.3-201ENSMUST00000223531 2069 ntBASIC6□□□□□ -1.45
Col1a1P11087 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC6□□□□□ -1.45
Col1a1P11087 Gm45222-201ENSMUST00000207029 4307 ntBASIC6□□□□□ -1.45
Col1a1P11087 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col1a1P11087 AC126439.1-201ENSMUST00000226772 2104 ntBASIC6□□□□□ -1.45
Col1a1P11087 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col1a1P11087 Gm37127-201ENSMUST00000192924 3036 ntBASIC6□□□□□ -1.45
Col1a1P11087 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC6□□□□□ -1.45
Col1a1P11087 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC6□□□□□ -1.45
Col1a1P11087 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
Col1a1P11087 Gm14304-201ENSMUST00000117272 446 ntBASIC6□□□□□ -1.45
Col1a1P11087 Gm11911-201ENSMUST00000117938 1023 ntBASIC6□□□□□ -1.45
Col1a1P11087 Gm11699-201ENSMUST00000119016 401 ntBASIC6□□□□□ -1.45
Col1a1P11087 Gm12583-201ENSMUST00000120677 853 ntBASIC6□□□□□ -1.45
Col1a1P11087 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC6□□□□□ -1.45
Col1a1P11087 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col1a1P11087 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col1a1P11087 Gm28957-201ENSMUST00000190174 373 ntBASIC6□□□□□ -1.45
Col1a1P11087 Gm9442-201ENSMUST00000194242 319 ntBASIC6□□□□□ -1.45
Col1a1P11087 Gm37167-201ENSMUST00000194946 396 ntBASIC6□□□□□ -1.45
Col1a1P11087 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC6□□□□□ -1.45
Col1a1P11087 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC6□□□□□ -1.45
Col1a1P11087 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC6□□□□□ -1.45
Col1a1P11087 Gm10540-201ENSMUST00000097581 276 ntBASIC6□□□□□ -1.45
Col1a1P11087 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col1a1P11087 Gm37049-201ENSMUST00000194356 1983 ntBASIC6□□□□□ -1.45
Col1a1P11087 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col1a1P11087 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Col1a1P11087 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col1a1P11087 AC107645.1-201ENSMUST00000228660 1810 ntBASIC6□□□□□ -1.45
Col1a1P11087 Gm42494-201ENSMUST00000196515 3051 ntBASIC6□□□□□ -1.45
Col1a1P11087 Gm8700-201ENSMUST00000222187 3054 ntBASIC6□□□□□ -1.45
Col1a1P11087 Gm45635-201ENSMUST00000211516 2134 ntBASIC6□□□□□ -1.45
Col1a1P11087 Gm42725-201ENSMUST00000199296 4193 ntBASIC6□□□□□ -1.45
Col1a1P11087 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col1a1P11087 Gm42598-201ENSMUST00000200110 2437 ntBASIC5.99□□□□□ -1.45
Col1a1P11087 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col1a1P11087 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.99□□□□□ -1.45
Col1a1P11087 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col1a1P11087 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.99□□□□□ -1.45
Col1a1P11087 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.99□□□□□ -1.45
Col1a1P11087 Gm12884-201ENSMUST00000120371 325 ntBASIC5.99□□□□□ -1.45
Col1a1P11087 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
Col1a1P11087 Scarna10-201ENSMUST00000158992 325 ntBASIC5.99□□□□□ -1.45
Col1a1P11087 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.99□□□□□ -1.45
Col1a1P11087 Gm28685-201ENSMUST00000187545 1101 ntBASIC5.99□□□□□ -1.45
Col1a1P11087 Gm8861-201ENSMUST00000196346 832 ntBASIC5.99□□□□□ -1.45
Col1a1P11087 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.99□□□□□ -1.45
Col1a1P11087 Gm8891-201ENSMUST00000198546 832 ntBASIC5.99□□□□□ -1.45
Col1a1P11087 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.99□□□□□ -1.45
Col1a1P11087 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC5.99□□□□□ -1.45
Col1a1P11087 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.99□□□□□ -1.45
Col1a1P11087 Gm18601-201ENSMUST00000220831 634 ntBASIC5.99□□□□□ -1.45
Col1a1P11087 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col1a1P11087 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col1a1P11087 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Col1a1P11087 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col1a1P11087 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.99□□□□□ -1.45
Col1a1P11087 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Col1a1P11087 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Col1a1P11087 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC5.99□□□□□ -1.45
Col1a1P11087 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.99□□□□□ -1.45
Col1a1P11087 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.99□□□□□ -1.45
Col1a1P11087 Gm37181-201ENSMUST00000192513 1727 ntBASIC5.99□□□□□ -1.45
Col1a1P11087 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col1a1P11087 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col1a1P11087 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col1a1P11087 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col1a1P11087 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
Col1a1P11087 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col1a1P11087 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Col1a1P11087 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
Col1a1P11087 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col1a1P11087 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC5.98□□□□□ -1.45
Col1a1P11087 Gm25913-201ENSMUST00000157617 135 ntBASIC5.98□□□□□ -1.45
Col1a1P11087 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms