Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm22350-201ENSMUST00000083924 156 ntBASIC6.14□□□□□ -1.43
Col4a1P02463 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a1P02463 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a1P02463 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.14□□□□□ -1.43
Col4a1P02463 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a1P02463 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
Col4a1P02463 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a1P02463 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Col4a1P02463 AC120347.1-201ENSMUST00000223326 1639 ntBASIC6.14□□□□□ -1.43
Col4a1P02463 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a1P02463 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a1P02463 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Col4a1P02463 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Col4a1P02463 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a1P02463 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col4a1P02463 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Col4a1P02463 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Col4a1P02463 Gm11633-201ENSMUST00000118176 444 ntBASIC6.14□□□□□ -1.43
Col4a1P02463 Gm23046-201ENSMUST00000158369 284 ntBASIC6.14□□□□□ -1.43
Col4a1P02463 Rab26os-201ENSMUST00000176215 477 ntBASIC6.14□□□□□ -1.43
Col4a1P02463 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC6.14□□□□□ -1.43
Col4a1P02463 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC6.14□□□□□ -1.43
Col4a1P02463 Gm29138-201ENSMUST00000191444 348 ntBASIC6.14□□□□□ -1.43
Col4a1P02463 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC6.14□□□□□ -1.43
Col4a1P02463 Gm37908-201ENSMUST00000195828 470 ntBASIC6.14□□□□□ -1.43
Col4a1P02463 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC6.14□□□□□ -1.43
Col4a1P02463 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Col4a1P02463 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col4a1P02463 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Col4a1P02463 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col4a1P02463 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col4a1P02463 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col4a1P02463 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col4a1P02463 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col4a1P02463 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col4a1P02463 Gm37767-201ENSMUST00000193239 1834 ntBASIC6.13□□□□□ -1.43
Col4a1P02463 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col4a1P02463 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col4a1P02463 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col4a1P02463 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col4a1P02463 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col4a1P02463 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col4a1P02463 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col4a1P02463 Gm23594-201ENSMUST00000104307 134 ntBASIC6.13□□□□□ -1.43
Col4a1P02463 Gm14628-201ENSMUST00000117508 635 ntBASIC6.13□□□□□ -1.43
Col4a1P02463 Gm6884-201ENSMUST00000119318 615 ntBASIC6.13□□□□□ -1.43
Col4a1P02463 Gm14831-201ENSMUST00000120253 409 ntBASIC6.13□□□□□ -1.43
Col4a1P02463 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Col4a1P02463 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col4a1P02463 Gm16107-201ENSMUST00000162523 862 ntBASIC6.13□□□□□ -1.43
Col4a1P02463 Gm5372-201ENSMUST00000187540 409 ntBASIC6.13□□□□□ -1.43
Col4a1P02463 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC6.13□□□□□ -1.43
Col4a1P02463 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC6.13□□□□□ -1.43
Col4a1P02463 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC6.13□□□□□ -1.43
Col4a1P02463 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Col4a1P02463 n-R5s168-201ENSMUST00000083948 104 ntBASIC6.13□□□□□ -1.43
Col4a1P02463 Gm43953-201ENSMUST00000203709 2867 ntBASIC6.13□□□□□ -1.43
Col4a1P02463 Gm2099-202ENSMUST00000223310 3341 ntBASIC6.13□□□□□ -1.43
Col4a1P02463 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col4a1P02463 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col4a1P02463 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col4a1P02463 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
Col4a1P02463 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col4a1P02463 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
Col4a1P02463 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col4a1P02463 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col4a1P02463 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col4a1P02463 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Col4a1P02463 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC6.12□□□□□ -1.43
Col4a1P02463 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC6.12□□□□□ -1.43
Col4a1P02463 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Col4a1P02463 Gm10087-201ENSMUST00000167650 330 ntBASIC6.12□□□□□ -1.43
Col4a1P02463 Gm18128-201ENSMUST00000172625 511 ntBASIC6.12□□□□□ -1.43
Col4a1P02463 Gm6155-201ENSMUST00000173735 341 ntBASIC6.12□□□□□ -1.43
Col4a1P02463 Gm26828-201ENSMUST00000180640 172 ntBASIC6.12□□□□□ -1.43
Col4a1P02463 Gm27611-201ENSMUST00000184690 108 ntBASIC6.12□□□□□ -1.43
Col4a1P02463 Mir6899-201ENSMUST00000184798 64 ntBASIC6.12□□□□□ -1.43
Col4a1P02463 Gm27564-201ENSMUST00000185196 96 ntBASIC6.12□□□□□ -1.43
Col4a1P02463 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col4a1P02463 Gm18426-201ENSMUST00000191874 973 ntBASIC6.12□□□□□ -1.43
Col4a1P02463 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC6.12□□□□□ -1.43
Col4a1P02463 AC136146.1-201ENSMUST00000196180 91 ntBASIC6.12□□□□□ -1.43
Col4a1P02463 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC6.12□□□□□ -1.43
Col4a1P02463 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC6.12□□□□□ -1.43
Col4a1P02463 AC158803.3-201ENSMUST00000220024 211 ntBASIC6.12□□□□□ -1.43
Col4a1P02463 Gm6988-201ENSMUST00000222676 375 ntBASIC6.12□□□□□ -1.43
Col4a1P02463 AC161252.2-201ENSMUST00000224978 374 ntBASIC6.12□□□□□ -1.43
Col4a1P02463 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col4a1P02463 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col4a1P02463 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col4a1P02463 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col4a1P02463 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col4a1P02463 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col4a1P02463 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.12□□□□□ -1.43
Col4a1P02463 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col4a1P02463 Gm10727-201ENSMUST00000197107 1602 ntBASIC6.12□□□□□ -1.43
Col4a1P02463 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.12□□□□□ -1.43
Col4a1P02463 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col4a1P02463 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Col4a1P02463 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 106.6 ms