Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 AC124510.2-201ENSMUST00000221958 683 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 AC091783.2-201ENSMUST00000224626 740 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 AC132317.2-201ENSMUST00000227301 519 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm9762-201ENSMUST00000036976 444 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Rny3-201ENSMUST00000083011 102 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm10794-201ENSMUST00000099624 207 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm16436-201ENSMUST00000121510 1607 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm43891-201ENSMUST00000205132 3112 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm37248-201ENSMUST00000193576 3174 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm24989-201ENSMUST00000104461 88 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm6429-201ENSMUST00000117144 475 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm14293-201ENSMUST00000118528 577 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm12375-201ENSMUST00000119331 921 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm13444-201ENSMUST00000119445 522 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm12174-201ENSMUST00000119853 813 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm14489-201ENSMUST00000120868 901 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm24438-201ENSMUST00000157893 115 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm25556-201ENSMUST00000158077 144 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm6155-201ENSMUST00000173735 341 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm19203-201ENSMUST00000174049 939 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm22990-201ENSMUST00000175427 89 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm20612-201ENSMUST00000176318 236 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm27193-201ENSMUST00000184217 586 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm29563-201ENSMUST00000187249 496 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm28788-201ENSMUST00000189717 375 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm29558-201ENSMUST00000190134 375 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm29605-201ENSMUST00000190800 292 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Trbv22-201ENSMUST00000191697 291 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm43744-201ENSMUST00000196387 688 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm5853-201ENSMUST00000197183 632 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm43007-201ENSMUST00000197618 291 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm8774-201ENSMUST00000203621 692 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm44277-201ENSMUST00000205128 649 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm33626-201ENSMUST00000206790 828 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 AC122371.2-201ENSMUST00000220583 366 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gm9321-201ENSMUST00000221179 778 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 AC154510.1-201ENSMUST00000223925 737 ntBASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Pcdh1F7BJK1 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 114.1 ms