Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Srp54bE9PXC0 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Srp54bE9PXC0 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Gm26355-201ENSMUST00000158220 105 ntBASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.35□□□□□ -1.55
Srp54bE9PXC0 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Gm17223-201ENSMUST00000171413 481 ntBASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Gm21803-201ENSMUST00000188897 693 ntBASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Gm28567-201ENSMUST00000190270 693 ntBASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Gm37044-201ENSMUST00000193531 693 ntBASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Gm37336-202ENSMUST00000193705 468 ntBASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Gm38369-201ENSMUST00000195101 693 ntBASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Gm44108-201ENSMUST00000203525 422 ntBASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Gm45215-201ENSMUST00000206407 395 ntBASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC5.35□□□□□ -1.55
Srp54bE9PXC0 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Gm20368-201ENSMUST00000220716 301 ntBASIC5.35□□□□□ -1.55
Srp54bE9PXC0 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.35□□□□□ -1.55
Srp54bE9PXC0 CT485612.1-201ENSMUST00000222555 382 ntBASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Mir31-201ENSMUST00000083474 106 ntBASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Srp54bE9PXC0 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Srp54bE9PXC0 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Gm18422-202ENSMUST00000203798 2214 ntBASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC5.34□□□□□ -1.55
Srp54bE9PXC0 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Mir5112-201ENSMUST00000174897 60 ntBASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Mir3062-201ENSMUST00000174986 105 ntBASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Gm37073-201ENSMUST00000192469 1222 ntBASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Gm19002-201ENSMUST00000192649 1012 ntBASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Gm44559-201ENSMUST00000207177 1012 ntBASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Gm45908-201ENSMUST00000212977 1177 ntBASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Gm6362-201ENSMUST00000217686 836 ntBASIC5.34□□□□□ -1.55
Srp54bE9PXC0 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC5.34□□□□□ -1.55
Srp54bE9PXC0 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC5.34□□□□□ -1.55
Srp54bE9PXC0 AC134860.4-201ENSMUST00000223592 978 ntBASIC5.34□□□□□ -1.55
Srp54bE9PXC0 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.34□□□□□ -1.55
Srp54bE9PXC0 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Gm43781-201ENSMUST00000197634 2681 ntBASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Srp54bE9PXC0 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Srp54bE9PXC0 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
Srp54bE9PXC0 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
Srp54bE9PXC0 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
Srp54bE9PXC0 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Srp54bE9PXC0 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.33□□□□□ -1.56
Srp54bE9PXC0 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Srp54bE9PXC0 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Srp54bE9PXC0 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Srp54bE9PXC0 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
Srp54bE9PXC0 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Srp54bE9PXC0 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Srp54bE9PXC0 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Srp54bE9PXC0 Gm11970-201ENSMUST00000116105 320 ntBASIC5.33□□□□□ -1.56
Srp54bE9PXC0 Gm12641-201ENSMUST00000117874 985 ntBASIC5.33□□□□□ -1.56
Srp54bE9PXC0 Gm15493-201ENSMUST00000119461 528 ntBASIC5.33□□□□□ -1.56
Srp54bE9PXC0 Gm12685-201ENSMUST00000121702 214 ntBASIC5.33□□□□□ -1.56
Srp54bE9PXC0 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Srp54bE9PXC0 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Srp54bE9PXC0 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.33□□□□□ -1.56
Srp54bE9PXC0 Gm25048-201ENSMUST00000158598 91 ntBASIC5.33□□□□□ -1.56
Srp54bE9PXC0 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 132.3 ms