Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 AC154227.1-201ENSMUST00000228809 2467 ntBASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Gm5809-201ENSMUST00000121854 529 ntBASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Gm22816-201ENSMUST00000157450 117 ntBASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Gm23046-201ENSMUST00000158369 284 ntBASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Gm38279-201ENSMUST00000194067 1131 ntBASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Gm44816-201ENSMUST00000206666 477 ntBASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Gm37186-201ENSMUST00000195629 2861 ntBASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm15390-201ENSMUST00000120323 738 ntBASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm13118-201ENSMUST00000120402 549 ntBASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm22890-201ENSMUST00000158642 144 ntBASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm21909-201ENSMUST00000178260 439 ntBASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm27695-201ENSMUST00000184301 91 ntBASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm4987-201ENSMUST00000078326 408 ntBASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 n-R5s88-201ENSMUST00000083173 118 ntBASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm43503-201ENSMUST00000200033 3408 ntBASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm43059-201ENSMUST00000202437 1388 ntBASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Itpr1-201ENSMUST00000032192 9870 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm22115-201ENSMUST00000103976 133 ntBASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm23923-201ENSMUST00000104108 133 ntBASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm14515-201ENSMUST00000121327 216 ntBASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm24627-201ENSMUST00000122764 138 ntBASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm37084-201ENSMUST00000191688 5898 ntBASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm43485-201ENSMUST00000199292 1710 ntBASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 4931406P16Rik-201ENSMUST00000085592 5798 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm37834-201ENSMUST00000194517 3035 ntBASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm37967-201ENSMUST00000195634 2665 ntBASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm25407-201ENSMUST00000104102 134 ntBASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm15231-201ENSMUST00000119174 447 ntBASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm14739-201ENSMUST00000120424 802 ntBASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm17014-201ENSMUST00000120765 168 ntBASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm42983-201ENSMUST00000199879 815 ntBASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm44648-201ENSMUST00000208267 329 ntBASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 AC123067.1-201ENSMUST00000217711 462 ntBASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 AC119241.1-201ENSMUST00000223651 534 ntBASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Gm19410-201ENSMUST00000207505 6352 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a3E9PWQ3 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Col6a3E9PWQ3 Fmn1-203ENSMUST00000102547 4967 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a3E9PWQ3 AC153912.2-201ENSMUST00000215840 2015 ntBASIC4.91□□□□□ -1.62
Col6a3E9PWQ3 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.91□□□□□ -1.62
Col6a3E9PWQ3 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
Col6a3E9PWQ3 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a3E9PWQ3 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a3E9PWQ3 Lyrm1-205ENSMUST00000207270 5845 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a3E9PWQ3 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Col6a3E9PWQ3 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC4.91□□□□□ -1.62
Col6a3E9PWQ3 Gm28148-201ENSMUST00000186924 697 ntBASIC4.91□□□□□ -1.62
Col6a3E9PWQ3 Gm17780-201ENSMUST00000207142 612 ntBASIC4.91□□□□□ -1.62
Col6a3E9PWQ3 Gm18618-201ENSMUST00000222211 473 ntBASIC4.91□□□□□ -1.62
Col6a3E9PWQ3 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 106.4 ms