Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col6a4A2AX52 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a4A2AX52 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col6a4A2AX52 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a4A2AX52 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a4A2AX52 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a4A2AX52 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a4A2AX52 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col6a4A2AX52 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a4A2AX52 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a4A2AX52 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col6a4A2AX52 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a4A2AX52 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a4A2AX52 Gm6366-201ENSMUST00000198766 826 ntBASIC4.31□□□□□ -1.72
Col6a4A2AX52 Gm44108-201ENSMUST00000203525 422 ntBASIC4.31□□□□□ -1.72
Col6a4A2AX52 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC4.31□□□□□ -1.72
Col6a4A2AX52 AC125399.1-201ENSMUST00000224236 595 ntBASIC4.31□□□□□ -1.72
Col6a4A2AX52 AC125405.1-201ENSMUST00000226406 589 ntBASIC4.31□□□□□ -1.72
Col6a4A2AX52 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a4A2AX52 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Col6a4A2AX52 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC4.31□□□□□ -1.72
Col6a4A2AX52 Gm28320-201ENSMUST00000187777 2273 ntBASIC4.31□□□□□ -1.72
Col6a4A2AX52 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a4A2AX52 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a4A2AX52 Gm43567-201ENSMUST00000197581 1978 ntBASIC4.31□□□□□ -1.72
Col6a4A2AX52 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col6a4A2AX52 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC4.31□□□□□ -1.72
Col6a4A2AX52 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col6a4A2AX52 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col6a4A2AX52 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC4.31□□□□□ -1.72
Col6a4A2AX52 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
Col6a4A2AX52 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col6a4A2AX52 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Mir546-201ENSMUST00000102105 121 ntBASIC4.3□□□□□ -1.72
Col6a4A2AX52 Gm22266-201ENSMUST00000104011 138 ntBASIC4.3□□□□□ -1.72
Col6a4A2AX52 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Esd-ps-201ENSMUST00000170684 847 ntBASIC4.3□□□□□ -1.72
Col6a4A2AX52 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC4.3□□□□□ -1.72
Col6a4A2AX52 AC166902.1-201ENSMUST00000216653 517 ntBASIC4.3□□□□□ -1.72
Col6a4A2AX52 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Gm37738-201ENSMUST00000192396 4716 ntBASIC4.3□□□□□ -1.72
Col6a4A2AX52 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Gm14849-201ENSMUST00000122293 2846 ntBASIC4.3□□□□□ -1.72
Col6a4A2AX52 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.3□□□□□ -1.72
Col6a4A2AX52 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col6a4A2AX52 AC131667.1-201ENSMUST00000214665 2175 ntBASIC4.3□□□□□ -1.72
Col6a4A2AX52 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Gm42513-201ENSMUST00000197831 2119 ntBASIC4.3□□□□□ -1.72
Col6a4A2AX52 Gm43528-201ENSMUST00000199492 1674 ntBASIC4.3□□□□□ -1.72
Col6a4A2AX52 AC103672.2-201ENSMUST00000228146 1687 ntBASIC4.3□□□□□ -1.72
Col6a4A2AX52 Gm14756-201ENSMUST00000116395 240 ntBASIC4.3□□□□□ -1.72
Col6a4A2AX52 Gm13733-201ENSMUST00000117290 535 ntBASIC4.3□□□□□ -1.72
Col6a4A2AX52 Gm11822-201ENSMUST00000119177 415 ntBASIC4.3□□□□□ -1.72
Col6a4A2AX52 Gm13000-201ENSMUST00000120937 496 ntBASIC4.3□□□□□ -1.72
Col6a4A2AX52 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Gm15905-201ENSMUST00000137042 298 ntBASIC4.3□□□□□ -1.72
Col6a4A2AX52 Gm24735-201ENSMUST00000158859 118 ntBASIC4.3□□□□□ -1.72
Col6a4A2AX52 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a4A2AX52 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC4.3□□□□□ -1.72
Col6a4A2AX52 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.3□□□□□ -1.72
Col6a4A2AX52 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col6a4A2AX52 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a4A2AX52 AC168056.3-201ENSMUST00000225395 2540 ntBASIC4.29□□□□□ -1.72
Col6a4A2AX52 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a4A2AX52 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col6a4A2AX52 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col6a4A2AX52 Gm15388-201ENSMUST00000121578 726 ntBASIC4.29□□□□□ -1.72
Col6a4A2AX52 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a4A2AX52 Mir6344-201ENSMUST00000183462 104 ntBASIC4.29□□□□□ -1.72
Col6a4A2AX52 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.29□□□□□ -1.72
Col6a4A2AX52 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC4.29□□□□□ -1.72
Col6a4A2AX52 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC4.29□□□□□ -1.72
Col6a4A2AX52 AC142273.1-201ENSMUST00000213723 673 ntBASIC4.29□□□□□ -1.72
Col6a4A2AX52 AC159886.1-201ENSMUST00000217099 1091 ntBASIC4.29□□□□□ -1.72
Col6a4A2AX52 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC4.29□□□□□ -1.72
Col6a4A2AX52 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col6a4A2AX52 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a4A2AX52 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms