Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 AC144628.2-201ENSMUST00000227374 352 ntBASIC6.36□□□□□ -1.39
Trim39Q9ESN2 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.36□□□□□ -1.39
Trim39Q9ESN2 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Trim39Q9ESN2 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Trim39Q9ESN2 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim39Q9ESN2 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Trim39Q9ESN2 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim39Q9ESN2 Gm44530-201ENSMUST00000207920 3559 ntBASIC6.36□□□□□ -1.39
Trim39Q9ESN2 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim39Q9ESN2 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim39Q9ESN2 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim39Q9ESN2 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim39Q9ESN2 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.36□□□□□ -1.39
Trim39Q9ESN2 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Trim39Q9ESN2 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Trim39Q9ESN2 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Trim39Q9ESN2 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Trim39Q9ESN2 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Trim39Q9ESN2 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim39Q9ESN2 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim39Q9ESN2 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim39Q9ESN2 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm18908-201ENSMUST00000207125 1483 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm42727-201ENSMUST00000202446 2823 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm15399-201ENSMUST00000118055 724 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm12677-201ENSMUST00000118668 426 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm13486-201ENSMUST00000119910 282 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm15007-201ENSMUST00000119982 710 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm12515-201ENSMUST00000120116 361 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Mup-ps2-201ENSMUST00000142602 533 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm23501-201ENSMUST00000157744 256 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm24901-201ENSMUST00000158125 110 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Ear-ps9-201ENSMUST00000161963 460 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm26179-201ENSMUST00000177723 132 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm5527-201ENSMUST00000179821 642 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Pea15b-201ENSMUST00000182806 387 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm28418-201ENSMUST00000186179 423 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm17946-201ENSMUST00000186856 538 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm28625-201ENSMUST00000188309 205 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm21715-201ENSMUST00000191056 694 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm17833-201ENSMUST00000197629 1065 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm43406-201ENSMUST00000200356 334 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm4751-201ENSMUST00000200620 1105 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm18838-201ENSMUST00000204855 886 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm45171-201ENSMUST00000206360 736 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm6929-201ENSMUST00000210930 468 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 AC151901.1-201ENSMUST00000218274 180 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 AC124732.4-201ENSMUST00000220930 1274 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 AL671874.1-201ENSMUST00000223746 1123 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 AC187103.4-201ENSMUST00000225399 300 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Ear14-201ENSMUST00000049559 468 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 n-R5s94-201ENSMUST00000082573 119 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm14912-201ENSMUST00000120166 1773 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 AC135119.1-204ENSMUST00000228036 2663 ntBASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim39Q9ESN2 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms