Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Gm12131-201ENSMUST00000117479 359 ntBASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Gm14831-201ENSMUST00000120253 409 ntBASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Gm9208-201ENSMUST00000120468 948 ntBASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Gm12808-201ENSMUST00000120597 404 ntBASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Gm15428-201ENSMUST00000121352 333 ntBASIC4.93□□□□□ -1.62
Cdc40Q9DC48 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Gm24186-201ENSMUST00000157983 127 ntBASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Gm4831-201ENSMUST00000174626 594 ntBASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC4.93□□□□□ -1.62
Cdc40Q9DC48 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Gm2914-201ENSMUST00000186120 328 ntBASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Mrgprb13-201ENSMUST00000188191 985 ntBASIC4.93□□□□□ -1.62
Cdc40Q9DC48 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Mir6516-201ENSMUST00000196236 110 ntBASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Gm44456-201ENSMUST00000196554 89 ntBASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Gm33952-201ENSMUST00000197795 408 ntBASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Gm6649-201ENSMUST00000199743 1165 ntBASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Gm29781-201ENSMUST00000203862 478 ntBASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Gm44559-201ENSMUST00000207177 1012 ntBASIC4.93□□□□□ -1.62
Cdc40Q9DC48 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 AC183268.2-201ENSMUST00000214513 446 ntBASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 AC153961.2-201ENSMUST00000218877 164 ntBASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Mir129-1-201ENSMUST00000083535 73 ntBASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 AC151971.5-201ENSMUST00000214422 3254 ntBASIC4.93□□□□□ -1.62
Cdc40Q9DC48 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Gm43831-201ENSMUST00000200461 2598 ntBASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 AC117769.3-201ENSMUST00000225814 1664 ntBASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Gm37212-201ENSMUST00000192582 3650 ntBASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Gm11975-201ENSMUST00000118772 481 ntBASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Gm2199-201ENSMUST00000119065 874 ntBASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Gm12281-201ENSMUST00000119536 298 ntBASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Gm10319-202ENSMUST00000159439 846 ntBASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Mir3062-201ENSMUST00000174986 105 ntBASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Gm21909-201ENSMUST00000178260 439 ntBASIC4.92□□□□□ -1.62
Cdc40Q9DC48 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Gm27541-201ENSMUST00000184078 122 ntBASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Gm38360-201ENSMUST00000195130 454 ntBASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Gm18215-201ENSMUST00000204429 798 ntBASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 CT025665.1-201ENSMUST00000215251 1199 ntBASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Gm19256-201ENSMUST00000218550 231 ntBASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Gm18904-201ENSMUST00000218756 329 ntBASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 AC158803.2-201ENSMUST00000219452 679 ntBASIC4.92□□□□□ -1.62
Cdc40Q9DC48 AC121137.1-201ENSMUST00000225272 602 ntBASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Gm23511-201ENSMUST00000083084 164 ntBASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Mir31-201ENSMUST00000083474 106 ntBASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms