Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Clp1Q99LI9 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Clp1Q99LI9 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Clp1Q99LI9 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Clp1Q99LI9 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
Clp1Q99LI9 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Clp1Q99LI9 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Clp1Q99LI9 Gm43557-201ENSMUST00000197100 2370 ntBASIC6.9□□□□□ -1.31
Clp1Q99LI9 AC102431.1-201ENSMUST00000223773 1449 ntBASIC6.9□□□□□ -1.31
Clp1Q99LI9 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC6.9□□□□□ -1.31
Clp1Q99LI9 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
Clp1Q99LI9 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Clp1Q99LI9 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Clp1Q99LI9 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Clp1Q99LI9 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC6.9□□□□□ -1.31
Clp1Q99LI9 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.31
Clp1Q99LI9 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC6.9□□□□□ -1.31
Clp1Q99LI9 Grik1-209ENSMUST00000227986 2942 ntBASIC6.9□□□□□ -1.31
Clp1Q99LI9 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Clp1Q99LI9 Gm37717-201ENSMUST00000192647 3027 ntBASIC6.9□□□□□ -1.31
Clp1Q99LI9 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.9□□□□□ -1.31
Clp1Q99LI9 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6.89□□□□□ -1.31
Clp1Q99LI9 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Gm43719-201ENSMUST00000200088 2199 ntBASIC6.89□□□□□ -1.31
Clp1Q99LI9 AC135119.1-202ENSMUST00000228435 2203 ntBASIC6.89□□□□□ -1.31
Clp1Q99LI9 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Gm44620-201ENSMUST00000209183 2887 ntBASIC6.89□□□□□ -1.31
Clp1Q99LI9 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Gm11848-201ENSMUST00000121207 973 ntBASIC6.89□□□□□ -1.31
Clp1Q99LI9 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC6.89□□□□□ -1.31
Clp1Q99LI9 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Mir3473f-201ENSMUST00000183743 136 ntBASIC6.89□□□□□ -1.31
Clp1Q99LI9 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Gm27970-201ENSMUST00000184854 407 ntBASIC6.89□□□□□ -1.31
Clp1Q99LI9 Gm8860-201ENSMUST00000193160 445 ntBASIC6.89□□□□□ -1.31
Clp1Q99LI9 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.89□□□□□ -1.31
Clp1Q99LI9 Gm44673-201ENSMUST00000205692 996 ntBASIC6.89□□□□□ -1.31
Clp1Q99LI9 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC6.89□□□□□ -1.31
Clp1Q99LI9 CT030254.1-201ENSMUST00000225450 1078 ntBASIC6.89□□□□□ -1.31
Clp1Q99LI9 AC160999.1-201ENSMUST00000225675 810 ntBASIC6.89□□□□□ -1.31
Clp1Q99LI9 AC151907.1-201ENSMUST00000228812 412 ntBASIC6.89□□□□□ -1.31
Clp1Q99LI9 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Gm26064-201ENSMUST00000083381 109 ntBASIC6.89□□□□□ -1.31
Clp1Q99LI9 Gm25515-201ENSMUST00000083858 157 ntBASIC6.89□□□□□ -1.31
Clp1Q99LI9 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Clp1Q99LI9 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Gm44584-201ENSMUST00000208395 2880 ntBASIC6.89□□□□□ -1.31
Clp1Q99LI9 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Clp1Q99LI9 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Clp1Q99LI9 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Clp1Q99LI9 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
Clp1Q99LI9 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Clp1Q99LI9 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Clp1Q99LI9 Gm44898-201ENSMUST00000205934 2223 ntBASIC6.88□□□□□ -1.31
Clp1Q99LI9 Gm42763-201ENSMUST00000199595 2087 ntBASIC6.88□□□□□ -1.31
Clp1Q99LI9 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC6.88□□□□□ -1.31
Clp1Q99LI9 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Clp1Q99LI9 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Clp1Q99LI9 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC6.88□□□□□ -1.31
Clp1Q99LI9 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Clp1Q99LI9 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Clp1Q99LI9 Gm22372-201ENSMUST00000104589 136 ntBASIC6.88□□□□□ -1.31
Clp1Q99LI9 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Clp1Q99LI9 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Clp1Q99LI9 Gm15016-201ENSMUST00000117300 720 ntBASIC6.88□□□□□ -1.31
Clp1Q99LI9 Gm12229-201ENSMUST00000120487 468 ntBASIC6.88□□□□□ -1.31
Clp1Q99LI9 Gm4789-201ENSMUST00000121708 1216 ntBASIC6.88□□□□□ -1.31
Clp1Q99LI9 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
Clp1Q99LI9 Gm23591-201ENSMUST00000157663 286 ntBASIC6.88□□□□□ -1.31
Clp1Q99LI9 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Clp1Q99LI9 Gm7745-201ENSMUST00000182235 973 ntBASIC6.88□□□□□ -1.31
Clp1Q99LI9 Mir6341-201ENSMUST00000183490 121 ntBASIC6.88□□□□□ -1.31
Clp1Q99LI9 Gm8009-201ENSMUST00000191672 436 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms