Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm7499-201ENSMUST00000210423 813 ntBASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 CT025665.1-201ENSMUST00000215251 1199 ntBASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Gm6171-201ENSMUST00000220760 645 ntBASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 CT025579.4-201ENSMUST00000224598 627 ntBASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Gm44822-201ENSMUST00000208559 6389 ntBASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Gm14711-201ENSMUST00000117056 217 ntBASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Gm12308-201ENSMUST00000120440 389 ntBASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Cfhr3-201ENSMUST00000170441 1022 ntBASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Gm9320-201ENSMUST00000184151 473 ntBASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Gm28066-201ENSMUST00000188657 472 ntBASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Gm37265-201ENSMUST00000191698 885 ntBASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Gm18426-201ENSMUST00000191874 973 ntBASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Gm412-201ENSMUST00000193360 948 ntBASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 AC153557.1-201ENSMUST00000217697 403 ntBASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 AC126554.4-201ENSMUST00000221055 409 ntBASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 AC154634.2-201ENSMUST00000225983 1184 ntBASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 AC154270.1-201ENSMUST00000227226 426 ntBASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Gm37181-201ENSMUST00000192513 1727 ntBASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Ccdc9Q8VC31 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Gm37053-201ENSMUST00000192399 2087 ntBASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Gm37890-201ENSMUST00000195610 3992 ntBASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Gm25795-201ENSMUST00000104421 132 ntBASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Gm11256-201ENSMUST00000118109 829 ntBASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Gm15332-201ENSMUST00000118386 357 ntBASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Gm17421-201ENSMUST00000167845 674 ntBASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Gm27348-201ENSMUST00000184511 170 ntBASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Gm38150-201ENSMUST00000192996 452 ntBASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Gm6119-201ENSMUST00000193443 1206 ntBASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Gm37809-201ENSMUST00000195050 931 ntBASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Gm43629-201ENSMUST00000201782 704 ntBASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 AC122464.1-201ENSMUST00000202789 770 ntBASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Gm43895-201ENSMUST00000203219 855 ntBASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Gm45596-201ENSMUST00000209279 434 ntBASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Gm10095-201ENSMUST00000222765 483 ntBASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 AC130536.1-201ENSMUST00000224425 271 ntBASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 n-R5s69-201ENSMUST00000083872 119 ntBASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Ccdc9Q8VC31 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC6.4□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms