Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Vps39Q8R5L3 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Vps39Q8R5L3 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
Vps39Q8R5L3 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Vps39Q8R5L3 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Vps39Q8R5L3 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Vps39Q8R5L3 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Gm14985-201ENSMUST00000118693 786 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Gm25152-201ENSMUST00000157117 114 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Gm22210-201ENSMUST00000158101 144 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Gm23115-201ENSMUST00000158480 108 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Gm6047-201ENSMUST00000167221 574 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Gm17152-201ENSMUST00000172430 535 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Mir3095-201ENSMUST00000175552 87 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Mir7220-201ENSMUST00000183978 60 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Gm8241-201ENSMUST00000189286 816 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Gm28188-201ENSMUST00000190483 236 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Gm37241-201ENSMUST00000191736 523 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Gm44604-201ENSMUST00000205475 496 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Gm17999-201ENSMUST00000211568 542 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Mir129-2-201ENSMUST00000083577 90 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Vps39Q8R5L3 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Gm23593-201ENSMUST00000104309 120 ntBASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Gm6134-201ENSMUST00000117265 171 ntBASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Gm11212-201ENSMUST00000118337 618 ntBASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Gm12244-201ENSMUST00000119500 291 ntBASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Gm14725-201ENSMUST00000120324 828 ntBASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Vps39Q8R5L3 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Gm24719-201ENSMUST00000157520 110 ntBASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Gm7152-201ENSMUST00000163570 605 ntBASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Mir7211-201ENSMUST00000184071 63 ntBASIC5.27□□□□□ -1.57
Vps39Q8R5L3 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Gm19086-201ENSMUST00000190772 665 ntBASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC5.27□□□□□ -1.57
Vps39Q8R5L3 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Gm42753-201ENSMUST00000196718 1268 ntBASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.27□□□□□ -1.57
Vps39Q8R5L3 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.27□□□□□ -1.57
Vps39Q8R5L3 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 117 ms