Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Mir6374-201ENSMUST00000184003 107 ntBASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Gm29516-201ENSMUST00000190402 468 ntBASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Gm37070-201ENSMUST00000193272 460 ntBASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Gm43712-201ENSMUST00000198020 291 ntBASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Gm43554-201ENSMUST00000199987 186 ntBASIC6.46□□□□□ -1.38
Vps53Q8CCB4 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Gm43771-201ENSMUST00000202931 1578 ntBASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 AC156569.1-201ENSMUST00000222020 3841 ntBASIC6.46□□□□□ -1.38
Vps53Q8CCB4 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.46□□□□□ -1.38
Vps53Q8CCB4 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 AC154184.2-201ENSMUST00000225335 349 ntBASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 CT025525.2-201ENSMUST00000227743 423 ntBASIC6.46□□□□□ -1.38
Vps53Q8CCB4 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 AC124569.3-201ENSMUST00000224860 1621 ntBASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Gm15189-201ENSMUST00000121164 1966 ntBASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Gm42492-201ENSMUST00000195780 2915 ntBASIC6.46□□□□□ -1.38
Vps53Q8CCB4 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Mir546-201ENSMUST00000102105 121 ntBASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Gm16200-201ENSMUST00000120385 331 ntBASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Gm9208-201ENSMUST00000120468 948 ntBASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Ear-ps5-201ENSMUST00000164700 463 ntBASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Gm27225-201ENSMUST00000183833 557 ntBASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Gm36999-201ENSMUST00000192756 1046 ntBASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Gm31306-201ENSMUST00000197517 508 ntBASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Gm44330-201ENSMUST00000200106 143 ntBASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Gm42926-201ENSMUST00000200496 697 ntBASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Gm18007-201ENSMUST00000205019 844 ntBASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Gm9278-201ENSMUST00000205508 553 ntBASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 AC122901.2-201ENSMUST00000216926 285 ntBASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Gm4928-201ENSMUST00000219622 850 ntBASIC6.45□□□□□ -1.38
Vps53Q8CCB4 AC116589.9-201ENSMUST00000221462 908 ntBASIC6.45□□□□□ -1.38
Vps53Q8CCB4 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Gm42725-201ENSMUST00000199296 4193 ntBASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Gm5844-201ENSMUST00000119417 2191 ntBASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 AC151904.4-201ENSMUST00000219868 1319 ntBASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms