Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Creb1-201ENSMUST00000049932 5009 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim35Q8C006 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim35Q8C006 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim35Q8C006 Rhox4d-201ENSMUST00000115175 936 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim35Q8C006 Gm4989-201ENSMUST00000118711 749 ntBASIC8.35□□□□□ -1.07
Trim35Q8C006 Gm14566-201ENSMUST00000118915 321 ntBASIC8.35□□□□□ -1.07
Trim35Q8C006 Gm14143-201ENSMUST00000121686 357 ntBASIC8.35□□□□□ -1.07
Trim35Q8C006 Gm15694-201ENSMUST00000121984 283 ntBASIC8.35□□□□□ -1.07
Trim35Q8C006 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC8.35□□□□□ -1.07
Trim35Q8C006 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC8.35□□□□□ -1.07
Trim35Q8C006 Elf5-207ENSMUST00000171693 965 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Trim35Q8C006 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Trim35Q8C006 Gm24561-201ENSMUST00000175182 95 ntBASIC8.35□□□□□ -1.07
Trim35Q8C006 Mir669k-201ENSMUST00000177742 127 ntBASIC8.35□□□□□ -1.07
Trim35Q8C006 Gm25673-201ENSMUST00000179957 127 ntBASIC8.35□□□□□ -1.07
Trim35Q8C006 Gm19402-201ENSMUST00000180297 801 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Trim35Q8C006 Gm29068-201ENSMUST00000191607 400 ntBASIC8.35□□□□□ -1.07
Trim35Q8C006 Gm18428-201ENSMUST00000194986 791 ntBASIC8.35□□□□□ -1.07
Trim35Q8C006 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC8.35□□□□□ -1.07
Trim35Q8C006 4933407I05Rik-201ENSMUST00000213311 482 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim35Q8C006 Gm32834-202ENSMUST00000222417 655 ntTSL 3 BASIC8.35□□□□□ -1.07
Trim35Q8C006 Gm2645-201ENSMUST00000223516 547 ntBASIC8.35□□□□□ -1.07
Trim35Q8C006 AC139758.2-201ENSMUST00000228380 529 ntBASIC8.35□□□□□ -1.07
Trim35Q8C006 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Trim35Q8C006 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim35Q8C006 Olfr1418-201ENSMUST00000079875 1072 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Trim35Q8C006 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Trim35Q8C006 D7Bwg0826e-201ENSMUST00000208484 3795 ntBASIC8.35□□□□□ -1.07
Trim35Q8C006 Gm45292-201ENSMUST00000211232 2207 ntBASIC8.35□□□□□ -1.07
Trim35Q8C006 Ap3m2-204ENSMUST00000210656 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim35Q8C006 Rian-202ENSMUST00000181253 2355 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim35Q8C006 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim35Q8C006 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim35Q8C006 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Trim35Q8C006 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Trim35Q8C006 Gm29671-201ENSMUST00000189438 2166 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim35Q8C006 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Trim35Q8C006 5430420F09Rik-201ENSMUST00000194956 1799 ntBASIC8.35□□□□□ -1.07
Trim35Q8C006 Cd99l2-201ENSMUST00000037391 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim35Q8C006 Ap1s3-203ENSMUST00000162342 2876 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim35Q8C006 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
Trim35Q8C006 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC8.35□□□□□ -1.07
Trim35Q8C006 Grip1-213ENSMUST00000147454 4520 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Trim35Q8C006 Gm28307-201ENSMUST00000190685 2694 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim35Q8C006 Ocln-202ENSMUST00000069756 4052 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim35Q8C006 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Trim35Q8C006 Gapt-201ENSMUST00000058806 2069 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim35Q8C006 Dnajc6-203ENSMUST00000106929 5128 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim35Q8C006 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
Trim35Q8C006 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim35Q8C006 Trappc12-202ENSMUST00000168129 3230 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim35Q8C006 Olfr1509-206ENSMUST00000215030 2525 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Trim35Q8C006 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim35Q8C006 Rcbtb2-218ENSMUST00000169479 3351 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim35Q8C006 Gm22661-201ENSMUST00000104192 132 ntBASIC8.34□□□□□ -1.07
Trim35Q8C006 Zscan22-202ENSMUST00000117189 2995 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim35Q8C006 Gm15516-201ENSMUST00000117292 193 ntBASIC8.34□□□□□ -1.07
Trim35Q8C006 Gm5393-201ENSMUST00000119106 272 ntBASIC8.34□□□□□ -1.07
Trim35Q8C006 Gm23887-201ENSMUST00000122683 172 ntBASIC8.34□□□□□ -1.07
Trim35Q8C006 n-R5s76-201ENSMUST00000122700 113 ntBASIC8.34□□□□□ -1.07
Trim35Q8C006 Gm12223-201ENSMUST00000135468 528 ntTSL 3 BASIC8.34□□□□□ -1.07
Trim35Q8C006 Fam229b-206ENSMUST00000136546 592 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
Trim35Q8C006 Gm10364-202ENSMUST00000153034 1001 ntBASIC8.34□□□□□ -1.07
Trim35Q8C006 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim35Q8C006 Gm8161-201ENSMUST00000168739 481 ntBASIC8.34□□□□□ -1.07
Trim35Q8C006 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim35Q8C006 Gm25156-201ENSMUST00000179809 79 ntBASIC8.34□□□□□ -1.07
Trim35Q8C006 1700019P21Rik-201ENSMUST00000186955 411 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim35Q8C006 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC8.34□□□□□ -1.07
Trim35Q8C006 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
Trim35Q8C006 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC8.34□□□□□ -1.07
Trim35Q8C006 AC158622.1-201ENSMUST00000217107 230 ntBASIC8.34□□□□□ -1.07
Trim35Q8C006 Wdr48-208ENSMUST00000217472 2997 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim35Q8C006 CT033781.3-201ENSMUST00000221886 504 ntTSL 2 BASIC8.34□□□□□ -1.07
Trim35Q8C006 AC142114.1-201ENSMUST00000227724 328 ntBASIC8.34□□□□□ -1.07
Trim35Q8C006 Llcfc1-201ENSMUST00000031900 741 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim35Q8C006 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Trim35Q8C006 Clec3a-201ENSMUST00000009018 591 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim35Q8C006 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim35Q8C006 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Trim35Q8C006 C6-201ENSMUST00000022788 2447 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
Trim35Q8C006 Il31ra-206ENSMUST00000224510 2946 ntAPPRIS ALT2 BASIC8.34□□□□□ -1.07
Trim35Q8C006 Bbs9-211ENSMUST00000150395 3425 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim35Q8C006 Dtna-201ENSMUST00000047954 1596 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim35Q8C006 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim35Q8C006 Zfp472-201ENSMUST00000039132 2376 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim35Q8C006 Olfr554-203ENSMUST00000215995 2515 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Trim35Q8C006 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim35Q8C006 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim35Q8C006 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Trim35Q8C006 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim35Q8C006 Zfp90-205ENSMUST00000212874 2195 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Trim35Q8C006 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Trim35Q8C006 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.08
Trim35Q8C006 Hdhd2-208ENSMUST00000148955 3069 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Trim35Q8C006 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim35Q8C006 Tom1l1-203ENSMUST00000107868 2093 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim35Q8C006 Snhg14-206ENSMUST00000187666 2517 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim35Q8C006 Gcnt2-201ENSMUST00000067778 4038 ntAPPRIS P5 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim35Q8C006 Smpd4-201ENSMUST00000006053 4623 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms